BLASTX nr result

ID: Atractylodes22_contig00036666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036666
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEY85031.1| putative pre-mRNA splicing factor [Camellia sinen...   143   2e-32
ref|XP_002267416.1| PREDICTED: pre-mRNA-processing factor 6-like...   138   4e-31
emb|CAN65423.1| hypothetical protein VITISV_024588 [Vitis vinifera]   138   4e-31
ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like...   134   8e-30
ref|XP_001755087.1| predicted protein [Physcomitrella patens sub...   133   2e-29

>gb|AEY85031.1| putative pre-mRNA splicing factor [Camellia sinensis]
          Length = 1023

 Score =  143 bits (360), Expect = 2e-32
 Identities = 74/117 (63%), Positives = 78/117 (66%)
 Frame = +2

Query: 65  GIMQAPVAPKNRLEFLNTRPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDRXXXXXXX 244
           G MQAPV PK+RLEFLNT+PPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDR       
Sbjct: 78  GGMQAPVVPKSRLEFLNTKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDRSATTIGG 137

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQKFDEFEGNDVGLFASAEYDEEDKEA 415
                                         NQKFDEFEGNDVGLFASAEYD+ED+EA
Sbjct: 138 AGPAGVGRGRGKGAGEEEEEDETDDKGYDENQKFDEFEGNDVGLFASAEYDDEDREA 194


>ref|XP_002267416.1| PREDICTED: pre-mRNA-processing factor 6-like [Vitis vinifera]
          Length = 1023

 Score =  138 bits (348), Expect = 4e-31
 Identities = 75/118 (63%), Positives = 77/118 (65%), Gaps = 1/118 (0%)
 Frame = +2

Query: 65  GIMQAPVAPKNRLEFLNTRPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDR-XXXXXX 241
           G MQAPV PK RLEFLNT+PPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDR       
Sbjct: 77  GGMQAPVVPKPRLEFLNTKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDRSATTIGG 136

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQKFDEFEGNDVGLFASAEYDEEDKEA 415
                                          NQKFDEFEGNDVGLFASAEYDE+DKEA
Sbjct: 137 AAAPGGIGRGRGKGGAEEEEEDEGDEKGYDENQKFDEFEGNDVGLFASAEYDEDDKEA 194


>emb|CAN65423.1| hypothetical protein VITISV_024588 [Vitis vinifera]
          Length = 1023

 Score =  138 bits (348), Expect = 4e-31
 Identities = 75/118 (63%), Positives = 77/118 (65%), Gaps = 1/118 (0%)
 Frame = +2

Query: 65  GIMQAPVAPKNRLEFLNTRPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDR-XXXXXX 241
           G MQAPV PK RLEFLNT+PPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDR       
Sbjct: 77  GGMQAPVVPKPRLEFLNTKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDRSATTIGG 136

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQKFDEFEGNDVGLFASAEYDEEDKEA 415
                                          NQKFDEFEGNDVGLFASAEYDE+DKEA
Sbjct: 137 AAAPGGIGRGRGKGGAEEEEEDEGDEKGYDENQKFDEFEGNDVGLFASAEYDEDDKEA 194


>ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like [Cucumis sativus]
           gi|449514699|ref|XP_004164455.1| PREDICTED:
           pre-mRNA-processing factor 6-like [Cucumis sativus]
          Length = 1023

 Score =  134 bits (337), Expect = 8e-30
 Identities = 72/117 (61%), Positives = 76/117 (64%)
 Frame = +2

Query: 65  GIMQAPVAPKNRLEFLNTRPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDRXXXXXXX 244
           G MQAP  PK RL+FLN++PPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDR       
Sbjct: 79  GGMQAPTIPKPRLDFLNSKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDR-SATTIG 137

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQKFDEFEGNDVGLFASAEYDEEDKEA 415
                                         NQKFDEFEGNDVGLFASAEYDE+DKEA
Sbjct: 138 GAAAAPPGRGRGKGGEEEEEDEGEDKGYDENQKFDEFEGNDVGLFASAEYDEDDKEA 194


>ref|XP_001755087.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162693680|gb|EDQ80031.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 938

 Score =  133 bits (334), Expect = 2e-29
 Identities = 72/116 (62%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
 Frame = +2

Query: 71  MQAPVAPKNRLEFLNTRPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDR-XXXXXXXX 247
           MQAPVAPK RL+FLN+RPP NYVAGLGRGATGFTTRSDIGPARAAPDLPDR         
Sbjct: 1   MQAPVAPKPRLDFLNSRPPANYVAGLGRGATGFTTRSDIGPARAAPDLPDRTATTIGGAA 60

Query: 248 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQKFDEFEGNDVGLFASAEYDEEDKEA 415
                                        NQKFDEFEGNDVGLFAS EYDE+DKEA
Sbjct: 61  AAPAGAGRGRGKGGNEEEEEEAEEKGYDENQKFDEFEGNDVGLFASGEYDEDDKEA 116


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