BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036661
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   132   4e-29
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-...   132   4e-29
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...   132   4e-29
gb|AAB82754.1| retrofit [Oryza longistaminata]                        129   2e-28
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   128   4e-28

>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/95 (68%), Positives = 77/95 (81%)
 Frame = +1

Query: 19   QIKRDQT*AIKRYKARLVAKGFRQQPGIDYQETFSPVVKSTTIRVVLSLAVTQKWSLRLR 198
            +IKR     + RYKARLVAKGF+Q+ GIDY++TFSPVVK+ TIR++LSLAV++ WS  LR
Sbjct: 993  KIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWS--LR 1050

Query: 199  QLDVQNAFLHGDLNETVYLQQPPGFVDPAKPDHVC 303
            QLDVQNAFLHG L E VY+ QPPGF DP KP HVC
Sbjct: 1051 QLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVC 1085


>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
          Length = 1621

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/95 (68%), Positives = 77/95 (81%)
 Frame = +1

Query: 19  QIKRDQT*AIKRYKARLVAKGFRQQPGIDYQETFSPVVKSTTIRVVLSLAVTQKWSLRLR 198
           +IKR     + RYKARLVAKGF+Q+ GIDY++TFSPVVK+ TIR++LSLAV++ WS  LR
Sbjct: 715 KIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWS--LR 772

Query: 199 QLDVQNAFLHGDLNETVYLQQPPGFVDPAKPDHVC 303
           QLDVQNAFLHG L E VY+ QPPGF DP KP HVC
Sbjct: 773 QLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVC 807


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1478

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/95 (68%), Positives = 77/95 (81%)
 Frame = +1

Query: 19   QIKRDQT*AIKRYKARLVAKGFRQQPGIDYQETFSPVVKSTTIRVVLSLAVTQKWSLRLR 198
            +IKR     + RYKARLVAKGF+Q+ GIDY++TFSPVVK+ TIR++LSLAV++ WS  LR
Sbjct: 986  KIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWS--LR 1043

Query: 199  QLDVQNAFLHGDLNETVYLQQPPGFVDPAKPDHVC 303
            QLDVQNAFLHG L E VY+ QPPGF DP KP HVC
Sbjct: 1044 QLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVC 1078


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  129 bits (324), Expect = 2e-28
 Identities = 63/95 (66%), Positives = 78/95 (82%)
 Frame = +1

Query: 19   QIKRDQT*AIKRYKARLVAKGFRQQPGIDYQETFSPVVKSTTIRVVLSLAVTQKWSLRLR 198
            +IKR     + RYKARLVAKGF+Q+ GIDY++TFSPVVK+ TIR++LS+AV++ WS  LR
Sbjct: 985  KIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWS--LR 1042

Query: 199  QLDVQNAFLHGDLNETVYLQQPPGFVDPAKPDHVC 303
            QLDVQNAFLHG L E VY+QQPPGF   +KPD+VC
Sbjct: 1043 QLDVQNAFLHGFLEEEVYMQQPPGFESSSKPDYVC 1077


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/95 (64%), Positives = 80/95 (84%)
 Frame = +1

Query: 19   QIKRDQT*AIKRYKARLVAKGFRQQPGIDYQETFSPVVKSTTIRVVLSLAVTQKWSLRLR 198
            +IKR Q  ++ RYKARLVAKGF+Q+ GIDY++TFSPVVK+ TIR++LS+AV++ W   LR
Sbjct: 971  KIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWC--LR 1028

Query: 199  QLDVQNAFLHGDLNETVYLQQPPGFVDPAKPDHVC 303
            QLDVQNAFLHG L E VY++QPPG+ +P+ PD+VC
Sbjct: 1029 QLDVQNAFLHGVLEEEVYMKQPPGYENPSTPDYVC 1063