BLASTX nr result

ID: Atractylodes22_contig00036657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036657
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]    87   1e-15
ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi...    84   9e-15
emb|CBI32403.3| unnamed protein product [Vitis vinifera]               84   9e-15
ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13

>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/67 (61%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
 Frame = -1

Query: 200 RKDVYTWNSMISAYVRNVIPSDAVNCLYKMSKY-EVKPDFYTFPPVLKACRNLNDGNRIH 24
           +KDVYTWNSMISAYV N    +A+ C Y++    E++PDFYTFPPVLKAC  L DG RIH
Sbjct: 179 QKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIH 238

Query: 23  SWISKTG 3
            W  K G
Sbjct: 239 CWAFKLG 245


>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/69 (59%), Positives = 52/69 (75%), Gaps = 3/69 (4%)
 Frame = -1

Query: 200 RKDVYTWNSMISAYVRNVIPSDAVNCLYKM---SKYEVKPDFYTFPPVLKACRNLNDGNR 30
           RKDVYTWNSMISAYVRN    +A++C Y++   +K++   DFYTFPPVLKAC+ L DG +
Sbjct: 136 RKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQA--DFYTFPPVLKACQTLVDGRK 193

Query: 29  IHSWISKTG 3
           IH W+ K G
Sbjct: 194 IHCWVFKLG 202


>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/67 (58%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = -1

Query: 200 RKDVYTWNSMISAYVRNVIPSDAVNCLYKMSKY-EVKPDFYTFPPVLKACRNLNDGNRIH 24
           +KDVY WNSMISAYV N    +A+ C Y++    E++PDFYTFPPVLKAC  L DG +IH
Sbjct: 179 QKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIH 238

Query: 23  SWISKTG 3
            W  K G
Sbjct: 239 CWAFKLG 245


>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/67 (58%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = -1

Query: 200 RKDVYTWNSMISAYVRNVIPSDAVNCLYKMSKY-EVKPDFYTFPPVLKACRNLNDGNRIH 24
           +KDVY WNSMISAYV N    +A+ C Y++    E++PDFYTFPPVLKAC  L DG +IH
Sbjct: 79  QKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIH 138

Query: 23  SWISKTG 3
            W  K G
Sbjct: 139 CWAFKLG 145


>ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 35/67 (52%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
 Frame = -1

Query: 200 RKDVYTWNSMISAYVRNVIPSDAVNCLYKM-SKYEVKPDFYTFPPVLKACRNLNDGNRIH 24
           RK++++WNSM+SAYVR     D+++C+ ++ S   V+PDFYTFPPVLKAC +L DG ++H
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMH 170

Query: 23  SWISKTG 3
            W+ K G
Sbjct: 171 CWVLKMG 177


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