BLASTX nr result
ID: Atractylodes22_contig00036621
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00036621
(462 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002516892.1| nucleic acid binding protein, putative [Rici... 110 8e-42
ref|XP_003529584.1| PREDICTED: zinc finger CCCH domain-containin... 105 4e-40
ref|XP_003550189.1| PREDICTED: zinc finger CCCH domain-containin... 106 7e-40
ref|XP_003609623.1| Zinc finger CCCH domain-containing protein [... 104 5e-39
ref|XP_003609624.1| Zinc finger CCCH domain-containing protein [... 104 5e-39
>ref|XP_002516892.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223543980|gb|EEF45506.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 481
Score = 110 bits (274), Expect(2) = 8e-42
Identities = 51/75 (68%), Positives = 59/75 (78%), Gaps = 3/75 (4%)
Frame = +1
Query: 247 GYPLRPGEKECSYYVKTGQCKFGITCKFHHPQPGGM-VASPAPALSAGPFSA--MPSAMY 417
GYPLRPGEKEC+YYVKTGQCKFG+TCKFHHPQP + + + +PAL P A SA+Y
Sbjct: 135 GYPLRPGEKECTYYVKTGQCKFGVTCKFHHPQPANLQIQAQSPALQVAPVPAPVPASALY 194
Query: 418 PNVQSPSGASSQQYG 462
PNVQSPS S+QQYG
Sbjct: 195 PNVQSPSVPSTQQYG 209
Score = 85.5 bits (210), Expect(2) = 8e-42
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 3 RFNHPRDRGSVVGALRASGGEYPERIGQPVCQYYMRTGMCKFGAS 137
RFNHPRDRG+V+GA RA E+PER+GQPVCQYYMRTG CKFGAS
Sbjct: 69 RFNHPRDRGAVLGAARAGAAEFPERVGQPVCQYYMRTGTCKFGAS 113
Score = 61.2 bits (147), Expect(2) = 2e-15
Identities = 34/74 (45%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Frame = +1
Query: 247 GYPLRPGEKECSYYVKTGQCKFGITCKFHHPQPGGMVASPAPALSAGPFSAMPSAMYP-- 420
G PLRPG C++Y + GQCKFG CKF HP G + SP SA S MP A YP
Sbjct: 342 GLPLRPGAPHCTHYTQRGQCKFGPACKFDHPM-GSLSYSP----SASSLSDMPVAPYPVG 396
Query: 421 ---NVQSPSGASSQ 453
+PS +SS+
Sbjct: 397 SSMGTLAPSSSSSE 410
Score = 45.8 bits (107), Expect(2) = 2e-15
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 66 YPERIGQPVCQYYMRTGMCKFGAS 137
+PER GQP CQYYM+TG CKFG+S
Sbjct: 297 FPERPGQPECQYYMKTGDCKFGSS 320
Score = 57.0 bits (136), Expect = 2e-06
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +1
Query: 250 YPLRPGEKECSYYVKTGQCKFGITCKFHHP 339
+P RPG+ EC YY+KTG CKFG +CK+HHP
Sbjct: 297 FPERPGQPECQYYMKTGDCKFGSSCKYHHP 326
>ref|XP_003529584.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
[Glycine max]
Length = 484
Score = 105 bits (262), Expect(2) = 4e-40
Identities = 49/74 (66%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Frame = +1
Query: 247 GYPLRPGEKECSYYVKTGQCKFGITCKFHHPQPGGM-VASPAPALSAGPFSA-MPSAMYP 420
GYPLR G+KECSYYVKTGQCKFG TCKFHHPQP G+ V +P+P P +PS MYP
Sbjct: 135 GYPLRVGQKECSYYVKTGQCKFGATCKFHHPQPAGVQVLAPSPVPPVSPLPVPVPSPMYP 194
Query: 421 NVQSPSGASSQQYG 462
V PSG S QQYG
Sbjct: 195 TVHPPSGPSQQQYG 208
Score = 84.3 bits (207), Expect(2) = 4e-40
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3
Query: 3 RFNHPRDRGSVVGALRASGGEYPERIGQPVCQYYMRTGMCKFGAS 137
RFNHPRDR +V+GA +GGE+PER+GQPVCQYYMRTG CKFGAS
Sbjct: 69 RFNHPRDRAAVIGAAPRTGGEFPERVGQPVCQYYMRTGSCKFGAS 113
Score = 55.5 bits (132), Expect(2) = 4e-12
Identities = 28/58 (48%), Positives = 33/58 (56%)
Frame = +1
Query: 247 GYPLRPGEKECSYYVKTGQCKFGITCKFHHPQPGGMVASPAPALSAGPFSAMPSAMYP 420
G PLRPG C++Y + G CKFG CKF HP G + SP SA + MP A YP
Sbjct: 347 GLPLRPGAPPCTHYTQRGVCKFGSACKFDHPM-GSLSYSP----SASSLADMPVAPYP 399
Score = 40.4 bits (93), Expect(2) = 4e-12
Identities = 20/37 (54%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +3
Query: 27 GSVVGALRASGGE--YPERIGQPVCQYYMRTGMCKFG 131
GS +G AS E +PER QP C +YM+TG CKFG
Sbjct: 287 GSSIGPSGASQKEHPFPERPDQPECHHYMKTGDCKFG 323
>ref|XP_003550189.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Glycine max]
Length = 484
Score = 106 bits (264), Expect(2) = 7e-40
Identities = 52/75 (69%), Positives = 55/75 (73%), Gaps = 3/75 (4%)
Frame = +1
Query: 247 GYPLRPGEKECSYYVKTGQCKFGITCKFHHPQPGGMVA---SPAPALSAGPFSAMPSAMY 417
GYPLR EKECSYYVKTGQCKFG TCKFHHPQP G+ A SP P +S P +PS MY
Sbjct: 135 GYPLRVAEKECSYYVKTGQCKFGATCKFHHPQPAGVQALAPSPVPPVSPLPV-PVPSPMY 193
Query: 418 PNVQSPSGASSQQYG 462
P VQ PSG S QQYG
Sbjct: 194 PTVQIPSGPSQQQYG 208
Score = 82.8 bits (203), Expect(2) = 7e-40
Identities = 33/45 (73%), Positives = 40/45 (88%)
Frame = +3
Query: 3 RFNHPRDRGSVVGALRASGGEYPERIGQPVCQYYMRTGMCKFGAS 137
RFNHPRDR +V+GA +GGE+PER+GQPVCQY+MRTG+CKFG S
Sbjct: 69 RFNHPRDRAAVIGAAARTGGEFPERVGQPVCQYFMRTGLCKFGVS 113
Score = 57.4 bits (137), Expect(2) = 3e-13
Identities = 32/74 (43%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Frame = +1
Query: 247 GYPLRPGEKECSYYVKTGQCKFGITCKFHHPQPGGMVASPAPALSAGPFSAMPSAMYP-- 420
G PLRPG C++Y + G CKFG CKF HP G + SP SA + MP A YP
Sbjct: 347 GLPLRPGAPPCTHYTQRGVCKFGSACKFDHPM-GSLSYSP----SASSLADMPVAPYPVG 401
Query: 421 ---NVQSPSGASSQ 453
+PS +SS+
Sbjct: 402 SSIGTLAPSSSSSE 415
Score = 42.0 bits (97), Expect(2) = 3e-13
Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 27 GSVVGALRASGGE--YPERIGQPVCQYYMRTGMCKFGAS 137
GS +G AS E +PER QP C +YM+TG CKFG S
Sbjct: 287 GSSIGPSGASQKEHPFPERPDQPECHHYMKTGECKFGLS 325
>ref|XP_003609623.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355510678|gb|AES91820.1| Zinc finger CCCH
domain-containing protein [Medicago truncatula]
Length = 582
Score = 104 bits (260), Expect(2) = 5e-39
Identities = 49/74 (66%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Frame = +1
Query: 247 GYPLRPGEKECSYYVKTGQCKFGITCKFHHPQP-GGMVASPAPALSAGPF-SAMPSAMYP 420
GYPLR GEKECSYYVKTGQCKFG TCKFHHPQP GG + +P+P P +PS +Y
Sbjct: 133 GYPLRVGEKECSYYVKTGQCKFGATCKFHHPQPAGGQMIAPSPVPQVSPLPMPVPSPIYQ 192
Query: 421 NVQSPSGASSQQYG 462
VQ PSG S QQYG
Sbjct: 193 TVQPPSGPSQQQYG 206
Score = 81.6 bits (200), Expect(2) = 5e-39
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 3 RFNHPRDRGSVVGALRASGGEYPERIGQPVCQYYMRTGMCKFGAS 137
RFNHPRDRG+V+GA R +G EYPER+GQPVCQYY RTG CKFGAS
Sbjct: 68 RFNHPRDRGAVIGAARIAG-EYPERVGQPVCQYYARTGSCKFGAS 111
>ref|XP_003609624.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355510679|gb|AES91821.1| Zinc finger CCCH
domain-containing protein [Medicago truncatula]
Length = 379
Score = 104 bits (260), Expect(2) = 5e-39
Identities = 49/74 (66%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Frame = +1
Query: 247 GYPLRPGEKECSYYVKTGQCKFGITCKFHHPQP-GGMVASPAPALSAGPF-SAMPSAMYP 420
GYPLR GEKECSYYVKTGQCKFG TCKFHHPQP GG + +P+P P +PS +Y
Sbjct: 133 GYPLRVGEKECSYYVKTGQCKFGATCKFHHPQPAGGQMIAPSPVPQVSPLPMPVPSPIYQ 192
Query: 421 NVQSPSGASSQQYG 462
VQ PSG S QQYG
Sbjct: 193 TVQPPSGPSQQQYG 206
Score = 81.6 bits (200), Expect(2) = 5e-39
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 3 RFNHPRDRGSVVGALRASGGEYPERIGQPVCQYYMRTGMCKFGAS 137
RFNHPRDRG+V+GA R +G EYPER+GQPVCQYY RTG CKFGAS
Sbjct: 68 RFNHPRDRGAVIGAARIAG-EYPERVGQPVCQYYARTGSCKFGAS 111