BLASTX nr result

ID: Atractylodes22_contig00036601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036601
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302516.1| predicted protein [Populus trichocarpa] gi|2...    47   2e-10
ref|XP_002275490.1| PREDICTED: F-box protein At5g07670 [Vitis vi...    44   3e-08
ref|XP_002326818.1| predicted protein [Populus trichocarpa] gi|2...    44   3e-08
emb|CBI16593.3| unnamed protein product [Vitis vinifera]               44   3e-08

>ref|XP_002302516.1| predicted protein [Populus trichocarpa] gi|222844242|gb|EEE81789.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score = 46.6 bits (109), Expect(2) = 2e-10
 Identities = 23/35 (65%), Positives = 27/35 (77%)
 Frame = +3

Query: 273 ASPWLIEHLSSFPTLEELHLQR*QSRNKQAVGDCF 377
           +SP L+EHL S PTLEELH+QR Q R+KQAV   F
Sbjct: 297 SSPGLLEHLGSCPTLEELHVQRCQMRDKQAVKALF 331



 Score = 43.1 bits (100), Expect(2) = 2e-10
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = +1

Query: 202 QCCQMLEDLVLCDH*LEGGWL 264
           QCCQMLE+L +CDH ++GGWL
Sbjct: 255 QCCQMLEELTICDHRMDGGWL 275


>ref|XP_002275490.1| PREDICTED: F-box protein At5g07670 [Vitis vinifera]
          Length = 473

 Score = 44.3 bits (103), Expect(2) = 3e-08
 Identities = 18/28 (64%), Positives = 21/28 (75%)
 Frame = +1

Query: 202 QCCQMLEDLVLCDH*LEGGWLYWLQVHG 285
           QCCQMLE+L LCDH ++GGWL  L   G
Sbjct: 280 QCCQMLEELTLCDHRMDGGWLSALSFCG 307



 Score = 38.5 bits (88), Expect(2) = 3e-08
 Identities = 20/35 (57%), Positives = 23/35 (65%)
 Frame = +3

Query: 273 ASPWLIEHLSSFPTLEELHLQR*QSRNKQAVGDCF 377
           ASP   +HL S PTLE LHLQR Q R+KQ+    F
Sbjct: 322 ASPGSDQHLGSCPTLETLHLQRCQMRDKQSTRALF 356


>ref|XP_002326818.1| predicted protein [Populus trichocarpa] gi|222835133|gb|EEE73568.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score = 44.3 bits (103), Expect(2) = 3e-08
 Identities = 23/35 (65%), Positives = 26/35 (74%)
 Frame = +3

Query: 273 ASPWLIEHLSSFPTLEELHLQR*QSRNKQAVGDCF 377
           +SP L EHL S PTLEELHLQ+ Q R+KQAV   F
Sbjct: 260 SSPGLPEHLGSCPTLEELHLQQCQMRDKQAVKALF 294



 Score = 38.5 bits (88), Expect(2) = 3e-08
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +1

Query: 202 QCCQMLEDLVLCDH*LEGGWL 264
           QCCQMLE+L + DH ++GGWL
Sbjct: 218 QCCQMLEELTIRDHRMDGGWL 238


>emb|CBI16593.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score = 44.3 bits (103), Expect(2) = 3e-08
 Identities = 18/28 (64%), Positives = 21/28 (75%)
 Frame = +1

Query: 202 QCCQMLEDLVLCDH*LEGGWLYWLQVHG 285
           QCCQMLE+L LCDH ++GGWL  L   G
Sbjct: 152 QCCQMLEELTLCDHRMDGGWLSALSFCG 179



 Score = 38.5 bits (88), Expect(2) = 3e-08
 Identities = 20/35 (57%), Positives = 23/35 (65%)
 Frame = +3

Query: 273 ASPWLIEHLSSFPTLEELHLQR*QSRNKQAVGDCF 377
           ASP   +HL S PTLE LHLQR Q R+KQ+    F
Sbjct: 194 ASPGSDQHLGSCPTLETLHLQRCQMRDKQSTRALF 228


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