BLASTX nr result

ID: Atractylodes22_contig00036588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036588
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95556.1| hypothetical protein LOC_Os11g47400 [Oryza sativa...    88   3e-15
dbj|BAJ99393.1| predicted protein [Hordeum vulgare subsp. vulgare]     88   3e-15
ref|XP_002876822.1| hypothetical protein ARALYDRAFT_322576 [Arab...    73   9e-11
ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding sub...    72   2e-10
ref|XP_003622730.1| Replication protein A1-like protein [Medicag...    72   2e-10

>gb|ABA95556.1| hypothetical protein LOC_Os11g47400 [Oryza sativa Japonica Group]
          Length = 296

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 37/124 (29%), Positives = 68/124 (54%)
 Frame = -3

Query: 375 YIITILGNIEDIQTQYRWFYLGCQGCSKKVNPVDGNYTCNSCNAEYNHTLTLYKLHLSVR 196
           ++ T +  I+ +Q   +W+Y+ C  C+K V   +  Y C +CN    +T   Y+L L + 
Sbjct: 11  FVFTSIVTIDRVQENIQWWYMSCNLCNKIVIQKNDKYHCRNCNKYPENTTPRYRLRLQIS 70

Query: 195 DDTGVVTCVVLHRIAERMIDSSLLKLLTQSDPNNKEFPREITNICGQQYVFRLQLSDYNI 16
           D T   +C +   +A+ M+++ +  LL   D  N E P  I  +CG+Q +F+ +LS+ N+
Sbjct: 71  DHTTSTSCTIFDDVAQSMLETPVSSLLNLLDGKNDEIPNIIQQLCGKQLIFKFKLSEQNL 130

Query: 15  KQGS 4
            +G+
Sbjct: 131 TEGT 134


>dbj|BAJ99393.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 333

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 40/115 (34%), Positives = 65/115 (56%)
 Frame = -3

Query: 351 IEDIQTQYRWFYLGCQGCSKKVNPVDGNYTCNSCNAEYNHTLTLYKLHLSVRDDTGVVTC 172
           I+ I T   W+Y+GC+ C+KKV     ++ C  C  E  +T   YKL L + D +   TC
Sbjct: 2   IKSIDTSDEWYYIGCRKCNKKVQKQGNHFYCPKCEKEPENTCPRYKLKLEICDLSATTTC 61

Query: 171 VVLHRIAERMIDSSLLKLLTQSDPNNKEFPREITNICGQQYVFRLQLSDYNIKQG 7
            +    A+++I  S   L+ + D +  E  ++I  ICGQ+ +F+ +L+DYN+K G
Sbjct: 62  TMFEAEAKKLIKQSASFLIDRDDFDIHEQTKQIQKICGQKLIFQFKLNDYNLKYG 116


>ref|XP_002876822.1| hypothetical protein ARALYDRAFT_322576 [Arabidopsis lyrata subsp.
           lyrata] gi|297322660|gb|EFH53081.1| hypothetical protein
           ARALYDRAFT_322576 [Arabidopsis lyrata subsp. lyrata]
          Length = 519

 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
 Frame = -3

Query: 378 GYIITILGNIEDIQTQYRWFYLGCQGCSKKVNPV---------DGNYTCNSCNAEYNHTL 226
           G    I+ +I  I T+  WFY+GC  C KKV+P           G Y C  C+     T 
Sbjct: 264 GGACNIIASIFSIDTKVPWFYIGCTKCFKKVSPYFNPETEEIEAGKYECEKCDTFVTTTS 323

Query: 225 TLYKLHLSVRDDTGVVTCVVLHRIAERMIDSSLLKLLTQSDPNNK--EFPREITNICGQQ 52
           T YK+  +V D TG  + ++  +   ++I  S  +LL Q    N+  + P+E+ ++ G Q
Sbjct: 324 TRYKVQATVIDHTGSASFLLFDQDVIKLIHKSAYELLEQQVQFNRSDQIPQELLDLQGLQ 383

Query: 51  YVFRLQLSD 25
           +VF++Q SD
Sbjct: 384 FVFKIQGSD 392


>ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|358347930|ref|XP_003638003.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355503881|gb|AES85084.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355503938|gb|AES85141.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 566

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 30/116 (25%), Positives = 64/116 (55%)
 Frame = -3

Query: 363 ILGNIEDIQTQYRWFYLGCQGCSKKVNPVDGNYTCNSCNAEYNHTLTLYKLHLSVRDDTG 184
           +L  I  I+++Y W+Y  C  C+ +V  V G   C  CN   N  +  +KLH+ V D+TG
Sbjct: 291 VLATICGIESEYSWYYQACTKCAGRVRTVAGRLYCGKCNTGRN-AVPRFKLHVQVMDNTG 349

Query: 183 VVTCVVLHRIAERMIDSSLLKLLTQSDPNNKEFPREITNICGQQYVFRLQLSDYNI 16
             + ++  R     ++ ++  ++     N+ ++P ++ +  G++ +F++++SD N+
Sbjct: 350 STSFILFDRNVSSYVNRTVQDMIDAQPNNSSDYPSDLDSFVGKRMLFKVEVSDGNL 405


>ref|XP_003622730.1| Replication protein A1-like protein [Medicago truncatula]
           gi|355497745|gb|AES78948.1| Replication protein A1-like
           protein [Medicago truncatula]
          Length = 542

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 30/116 (25%), Positives = 63/116 (54%)
 Frame = -3

Query: 363 ILGNIEDIQTQYRWFYLGCQGCSKKVNPVDGNYTCNSCNAEYNHTLTLYKLHLSVRDDTG 184
           +L  I  I+++Y W+Y  C  C  +V  V     C  CN   N  +  +KLH+ V D+TG
Sbjct: 269 VLATICGIESEYSWYYQACTKCVGRVRTVASRLYCGKCNTGRN-AVARFKLHVQVIDNTG 327

Query: 183 VVTCVVLHRIAERMIDSSLLKLLTQSDPNNKEFPREITNICGQQYVFRLQLSDYNI 16
             + ++  R   + ++ ++  ++     N+ ++P ++ +  G+Q +F++++SD N+
Sbjct: 328 STSFILFDRNVSKYVNGTIQDMIDAQPNNSSDYPSDLDSFVGKQMLFKVEVSDGNL 383


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