BLASTX nr result

ID: Atractylodes22_contig00036580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036580
         (1035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529271.1| Single-stranded DNA-binding protein, mitocho...   285   1e-74
ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding prote...   277   3e-72
ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding prote...   270   6e-70
gb|AFK40642.1| unknown [Lotus japonicus]                              269   9e-70
ref|XP_002874672.1| mitochondrially targeted single-stranded DNA...   268   1e-69

>ref|XP_002529271.1| Single-stranded DNA-binding protein, mitochondrial precursor,
           putative [Ricinus communis] gi|223531260|gb|EEF33103.1|
           Single-stranded DNA-binding protein, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 213

 Score =  285 bits (730), Expect = 1e-74
 Identities = 136/154 (88%), Positives = 148/154 (96%)
 Frame = +2

Query: 239 DFLPQKPDLQMQGVDPRKGWGFRGVHKAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMF 418
           DFL +KP+LQ+QGVDPRKGWGFRGVHKAIICGKVGQAP+QKILRNGRTVTIFTVGTGGMF
Sbjct: 59  DFLGEKPELQIQGVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMF 118

Query: 419 DQRTIGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSLVYVEGDIETRVYNDSINGEVK 598
           DQR +GAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNS VYVEG+IETRVYNDSI+GEVK
Sbjct: 119 DQRIVGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSSVYVEGEIETRVYNDSISGEVK 178

Query: 599 NIPEICIRRDGKIRLFKTGESISSISFDELREGL 700
           NIPEICIRRDGKIRL  +G+++S ISFD+LREGL
Sbjct: 179 NIPEICIRRDGKIRLVTSGKNVSDISFDDLREGL 212


>ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
           [Vitis vinifera] gi|296089740|emb|CBI39559.3| unnamed
           protein product [Vitis vinifera]
          Length = 208

 Score =  277 bits (709), Expect = 3e-72
 Identities = 135/154 (87%), Positives = 144/154 (93%)
 Frame = +2

Query: 239 DFLPQKPDLQMQGVDPRKGWGFRGVHKAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMF 418
           D + +KP+LQ+QGVDPRKGWGFRGVHKAIICGKVGQAP+QKILRNGRTVTIFTVGTGGMF
Sbjct: 54  DLVTEKPNLQLQGVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMF 113

Query: 419 DQRTIGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSLVYVEGDIETRVYNDSINGEVK 598
           DQR IG KDLPKPAQWHRIAVHNE LGAYAVQQL KNS VYVEGDIE RVYNDSINGEVK
Sbjct: 114 DQR-IGGKDLPKPAQWHRIAVHNEPLGAYAVQQLVKNSSVYVEGDIEVRVYNDSINGEVK 172

Query: 599 NIPEICIRRDGKIRLFKTGESISSISFDELREGL 700
           ++PEICIRRDG+IRL KTGESIS+IS DELREGL
Sbjct: 173 HVPEICIRRDGRIRLIKTGESISNISVDELREGL 206


>ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
           [Glycine max]
          Length = 217

 Score =  270 bits (689), Expect = 6e-70
 Identities = 128/154 (83%), Positives = 138/154 (89%)
 Frame = +2

Query: 239 DFLPQKPDLQMQGVDPRKGWGFRGVHKAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMF 418
           DFL +KP+LQ+QGVDP+KGWGFRGVHKAIICGKVGQAP+QKILRNGR +TIFTVGTGGMF
Sbjct: 63  DFLGEKPELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNITIFTVGTGGMF 122

Query: 419 DQRTIGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSLVYVEGDIETRVYNDSINGEVK 598
           DQR  G KDLPKPAQWHRIAVHN+ LG YAVQQL KNS VYVEGDIETRVYNDSING VK
Sbjct: 123 DQRIQGPKDLPKPAQWHRIAVHNDILGTYAVQQLFKNSSVYVEGDIETRVYNDSINGNVK 182

Query: 599 NIPEICIRRDGKIRLFKTGESISSISFDELREGL 700
           +IPEIC+RRDG+IRL K GESI   S DELREGL
Sbjct: 183 SIPEICVRRDGRIRLIKNGESIDKTSLDELREGL 216


>gb|AFK40642.1| unknown [Lotus japonicus]
          Length = 220

 Score =  269 bits (687), Expect = 9e-70
 Identities = 126/154 (81%), Positives = 140/154 (90%)
 Frame = +2

Query: 239 DFLPQKPDLQMQGVDPRKGWGFRGVHKAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMF 418
           DFL  KP+LQ+QGVDP++GWGFRGVHKAIICGKVGQAP+QKILRNG+ VTIFTVGTGGM 
Sbjct: 66  DFLGGKPELQLQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMS 125

Query: 419 DQRTIGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSLVYVEGDIETRVYNDSINGEVK 598
           DQR +GA+D+PKP QWHRIAVHN+ LGAYAVQQ+ KNS VYVEGDIETRVYNDSINGEVK
Sbjct: 126 DQRIVGARDMPKPPQWHRIAVHNDVLGAYAVQQICKNSSVYVEGDIETRVYNDSINGEVK 185

Query: 599 NIPEICIRRDGKIRLFKTGESISSISFDELREGL 700
           +IPEIC+RRDGKIRL K+GES   IS DELREGL
Sbjct: 186 SIPEICVRRDGKIRLIKSGESADKISLDELREGL 219


>ref|XP_002874672.1| mitochondrially targeted single-stranded DNA binding protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297320509|gb|EFH50931.1| mitochondrially targeted
           single-stranded DNA binding protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 201

 Score =  268 bits (686), Expect = 1e-69
 Identities = 128/155 (82%), Positives = 142/155 (91%)
 Frame = +2

Query: 239 DFLPQKPDLQMQGVDPRKGWGFRGVHKAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMF 418
           + + ++P+LQ  GVDPRKGWGFRGVH+AIICGKVGQAPLQKILRNGRTVTIFTVGTGGMF
Sbjct: 47  EIVSERPELQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMF 106

Query: 419 DQRTIGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSLVYVEGDIETRVYNDSINGEVK 598
           DQR +GA + PKPAQWHRIAVHNE LG+YAVQ+LAKNS VYVEGDIETRVYNDSI+ EVK
Sbjct: 107 DQRLVGATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVK 166

Query: 599 NIPEICIRRDGKIRLFKTGESISSISFDELREGLI 703
           +IPEIC+RRDGKIRL K GESIS ISFDEL+EGLI
Sbjct: 167 SIPEICVRRDGKIRLIKYGESISKISFDELKEGLI 201


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