BLASTX nr result

ID: Atractylodes22_contig00036565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036565
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606061.1| 50S ribosomal protein L2-B [Medicago truncat...   337   1e-90
ref|XP_003599582.1| 50S ribosomal protein L2 [Medicago truncatul...   337   2e-90
ref|XP_003605908.1| 50S ribosomal protein L2 [Medicago truncatul...   335   6e-90
gb|ACH47392.1| ribosomal protein L23 [Erodium chrysanthum]            302   5e-80
ref|YP_001837402.1| ribosomal protein L2 [Guizotia abyssinica] g...   288   5e-76

>ref|XP_003606061.1| 50S ribosomal protein L2-B [Medicago truncatula]
           gi|355507116|gb|AES88258.1| 50S ribosomal protein L2-B
           [Medicago truncatula]
          Length = 382

 Score =  337 bits (864), Expect = 1e-90
 Identities = 175/226 (77%), Positives = 178/226 (78%)
 Frame = -3

Query: 685 TDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRLRGKARRMGPIMGQT 506
           TDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRL  K RRM PIMG  
Sbjct: 46  TDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPIKGRRMRPIMGHR 105

Query: 505 MHYRRMIITLQPGYSIPPLRKKRT*IKILNSMAIHLYKTSTPSTRNGTVDSQVKSNPRNN 326
            HY+RMIIT                      MAIHLYKTS PSTR            RN 
Sbjct: 106 PHYKRMIIT----------------------MAIHLYKTSIPSTRT-----------RNR 132

Query: 325 LIYGQHHCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYI 146
           LIYGQHHCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNA+I
Sbjct: 133 LIYGQHHCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAHI 192

Query: 145 CLIHYRDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPL 8
           CLIHY DGEKRYILHPRGAIIGDTIV GTEVPIKMGNALPL+   L
Sbjct: 193 CLIHYGDGEKRYILHPRGAIIGDTIVYGTEVPIKMGNALPLSPYAL 238


>ref|XP_003599582.1| 50S ribosomal protein L2 [Medicago truncatula]
           gi|355488630|gb|AES69833.1| 50S ribosomal protein L2
           [Medicago truncatula]
          Length = 236

 Score =  337 bits (863), Expect = 2e-90
 Identities = 174/222 (78%), Positives = 177/222 (79%)
 Frame = -3

Query: 685 TDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRLRGKARRMGPIMGQT 506
           TDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRL  K RRM PIMG  
Sbjct: 46  TDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPIKGRRMRPIMGHR 105

Query: 505 MHYRRMIITLQPGYSIPPLRKKRT*IKILNSMAIHLYKTSTPSTRNGTVDSQVKSNPRNN 326
            HY+RMIIT                      MAIHLYKTS PSTR            RN 
Sbjct: 106 PHYKRMIIT----------------------MAIHLYKTSIPSTRT-----------RNR 132

Query: 325 LIYGQHHCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYI 146
           LIYGQHHCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNA+I
Sbjct: 133 LIYGQHHCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAHI 192

Query: 145 CLIHYRDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 20
           CLIHY DGEKRYILHPRGAIIGDTIV GTEVPIKMGNALPL+
Sbjct: 193 CLIHYGDGEKRYILHPRGAIIGDTIVYGTEVPIKMGNALPLS 234


>ref|XP_003605908.1| 50S ribosomal protein L2 [Medicago truncatula]
           gi|355506963|gb|AES88105.1| 50S ribosomal protein L2
           [Medicago truncatula]
          Length = 236

 Score =  335 bits (858), Expect = 6e-90
 Identities = 173/222 (77%), Positives = 176/222 (79%)
 Frame = -3

Query: 685 TDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRLRGKARRMGPIMGQT 506
           TDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRL    RRM PIMG  
Sbjct: 46  TDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPINGRRMRPIMGHR 105

Query: 505 MHYRRMIITLQPGYSIPPLRKKRT*IKILNSMAIHLYKTSTPSTRNGTVDSQVKSNPRNN 326
            HY+RMIIT                      MAIHLYKTS PSTR            RN 
Sbjct: 106 PHYKRMIIT----------------------MAIHLYKTSIPSTRT-----------RNR 132

Query: 325 LIYGQHHCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYI 146
           LIYGQHHCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNA+I
Sbjct: 133 LIYGQHHCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAHI 192

Query: 145 CLIHYRDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 20
           CLIHY DGEKRYILHPRGAIIGDTIV GTEVPIKMGNALPL+
Sbjct: 193 CLIHYGDGEKRYILHPRGAIIGDTIVYGTEVPIKMGNALPLS 234


>gb|ACH47392.1| ribosomal protein L23 [Erodium chrysanthum]
          Length = 250

 Score =  302 bits (773), Expect = 5e-80
 Identities = 160/232 (68%), Positives = 177/232 (76%), Gaps = 10/232 (4%)
 Frame = -3

Query: 685 TDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVKVIAMNSHRLRGKARRMGPIMGQT 506
           T KS RL  +NQYT+NVESG T+ EIK+WVEL FGVKVIAMNSHRL G  R     +G+ 
Sbjct: 20  TAKSFRLWLQNQYTYNVESGFTKREIKYWVELLFGVKVIAMNSHRLPGTRRTP---LGRR 76

Query: 505 MHYRRMIITLQPGYSIPPL---------RKKRT*IKILNSMAIHLYKT-STPSTRNGTVD 356
           M Y+RMIIT++ G S+P L          KK           I + K+ STP TR    D
Sbjct: 77  MEYKRMIITVKQGDSLPYLIIDDTENEMNKKELMASQRKDEGIEVNKSNSTPMTRTAVAD 136

Query: 355 SQVKSNPRNNLIYGQHHCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTI 176
           SQVKSNPRN+LIYG+HHCGKGRNARGIITAGHRGGGHKRLYR+IDFRRNEK I GRIVTI
Sbjct: 137 SQVKSNPRNHLIYGRHHCGKGRNARGIITAGHRGGGHKRLYRQIDFRRNEKGIDGRIVTI 196

Query: 175 EYDPNRNAYICLIHYRDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLT 20
           EYDPNRNA ICLIHY DGEKRYILHPRGA IGDTI+SGT VPIKMGNALPL+
Sbjct: 197 EYDPNRNASICLIHYGDGEKRYILHPRGARIGDTILSGTGVPIKMGNALPLS 248


>ref|YP_001837402.1| ribosomal protein L2 [Guizotia abyssinica]
           gi|183217803|ref|YP_001837423.1| ribosomal protein L2
           [Guizotia abyssinica] gi|179366297|gb|ACB86568.1|
           ribosomal protein L2 [Guizotia abyssinica]
           gi|179366318|gb|ACB86589.1| ribosomal protein L2
           [Guizotia abyssinica]
          Length = 274

 Score =  288 bits (738), Expect = 5e-76
 Identities = 137/137 (100%), Positives = 137/137 (100%)
 Frame = -3

Query: 412 MAIHLYKTSTPSTRNGTVDSQVKSNPRNNLIYGQHHCGKGRNARGIITAGHRGGGHKRLY 233
           MAIHLYKTSTPSTRNGTVDSQVKSNPRNNLIYGQHHCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGTVDSQVKSNPRNNLIYGQHHCGKGRNARGIITAGHRGGGHKRLY 60

Query: 232 RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYRDGEKRYILHPRGAIIGDTIVSGTEV 53
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYRDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYRDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 52  PIKMGNALPLTDMPLGT 2
           PIKMGNALPLTDMPLGT
Sbjct: 121 PIKMGNALPLTDMPLGT 137


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