BLASTX nr result

ID: Atractylodes22_contig00036534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036534
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300392.1| predicted protein [Populus trichocarpa] gi|2...   280   2e-73
emb|CBI39777.3| unnamed protein product [Vitis vinifera]              278   6e-73
ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleop...   278   6e-73
ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, ...   275   3e-72
ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-bindin...   271   8e-71

>ref|XP_002300392.1| predicted protein [Populus trichocarpa] gi|222847650|gb|EEE85197.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  280 bits (715), Expect = 2e-73
 Identities = 138/155 (89%), Positives = 144/155 (92%), Gaps = 1/155 (0%)
 Frame = -3

Query: 462 KIFIGGLPKDTQYNAFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 283
           KIFIGGL KDT Y  FNKHFGKYG+ITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED
Sbjct: 20  KIFIGGLAKDTTYATFNKHFGKYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79

Query: 282 THVFNGKQ-VEIKRTIPKGSALSKDFKTKKIFVGGIPTSLGEDEVGSFFSKHGKVVEHQI 106
           THV NGKQ VEIKRTIPKGS  SKDFKTKKIFVGGIP+S+ EDE  +FFSKHGKVVEHQI
Sbjct: 80  THVINGKQQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVTEDEFQNFFSKHGKVVEHQI 139

Query: 105 IRDHETNRSRGFGFVIFDSEEVVDELLSNGNMIDM 1
           IRDHETNRSRGFGF+IFDSEEVVDE+LSNGNMIDM
Sbjct: 140 IRDHETNRSRGFGFIIFDSEEVVDEMLSNGNMIDM 174


>emb|CBI39777.3| unnamed protein product [Vitis vinifera]
          Length = 293

 Score =  278 bits (710), Expect = 6e-73
 Identities = 133/154 (86%), Positives = 143/154 (92%)
 Frame = -3

Query: 462 KIFIGGLPKDTQYNAFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 283
           KIFIGGL KDT Y  FNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVD+VIED
Sbjct: 20  KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79

Query: 282 THVFNGKQVEIKRTIPKGSALSKDFKTKKIFVGGIPTSLGEDEVGSFFSKHGKVVEHQII 103
           THV NGKQVEIKRTIPKGS  SKDFKTKKIFVGG+P+++ EDE  +FFSK+GKVVEHQII
Sbjct: 80  THVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTEDEFKNFFSKYGKVVEHQII 139

Query: 102 RDHETNRSRGFGFVIFDSEEVVDELLSNGNMIDM 1
           RDHETNRSRGFGF+IFDSEEVVDE++S GNMIDM
Sbjct: 140 RDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDM 173


>ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
           vinifera] gi|147768836|emb|CAN78130.1| hypothetical
           protein VITISV_036088 [Vitis vinifera]
          Length = 348

 Score =  278 bits (710), Expect = 6e-73
 Identities = 133/154 (86%), Positives = 143/154 (92%)
 Frame = -3

Query: 462 KIFIGGLPKDTQYNAFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 283
           KIFIGGL KDT Y  FNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVD+VIED
Sbjct: 20  KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79

Query: 282 THVFNGKQVEIKRTIPKGSALSKDFKTKKIFVGGIPTSLGEDEVGSFFSKHGKVVEHQII 103
           THV NGKQVEIKRTIPKGS  SKDFKTKKIFVGG+P+++ EDE  +FFSK+GKVVEHQII
Sbjct: 80  THVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTEDEFKNFFSKYGKVVEHQII 139

Query: 102 RDHETNRSRGFGFVIFDSEEVVDELLSNGNMIDM 1
           RDHETNRSRGFGF+IFDSEEVVDE++S GNMIDM
Sbjct: 140 RDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDM 173


>ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
           communis] gi|223538031|gb|EEF39644.1| Heterogeneous
           nuclear ribonucleoprotein A1, putative [Ricinus
           communis]
          Length = 348

 Score =  275 bits (704), Expect = 3e-72
 Identities = 133/154 (86%), Positives = 142/154 (92%)
 Frame = -3

Query: 462 KIFIGGLPKDTQYNAFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 283
           KIFIGGL KDT Y  FNKHFG+YG+ITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED
Sbjct: 20  KIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79

Query: 282 THVFNGKQVEIKRTIPKGSALSKDFKTKKIFVGGIPTSLGEDEVGSFFSKHGKVVEHQII 103
           THV +GKQVEIKRTIPKGS  SKDFKTKKIFVGGIP+S+ EDE   FFSK+G+VVEHQII
Sbjct: 80  THVIHGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVTEDEFKGFFSKYGQVVEHQII 139

Query: 102 RDHETNRSRGFGFVIFDSEEVVDELLSNGNMIDM 1
           RDHETNRSRGFGF+IFDSEE VDE+LSNGNMIDM
Sbjct: 140 RDHETNRSRGFGFIIFDSEETVDEMLSNGNMIDM 173


>ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
           [Cucumis sativus] gi|449496860|ref|XP_004160246.1|
           PREDICTED: nuclear polyadenylated RNA-binding protein
           4-like [Cucumis sativus]
          Length = 347

 Score =  271 bits (692), Expect = 8e-71
 Identities = 129/154 (83%), Positives = 139/154 (90%)
 Frame = -3

Query: 462 KIFIGGLPKDTQYNAFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 283
           KIFIGGL KDT Y  FNKHFG YG+ITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED
Sbjct: 20  KIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79

Query: 282 THVFNGKQVEIKRTIPKGSALSKDFKTKKIFVGGIPTSLGEDEVGSFFSKHGKVVEHQII 103
           THV NGKQVEIKRTIPKG   SKDFKTKKIFVGGIP+++ EDE   FFSK+GK+VEHQII
Sbjct: 80  THVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTEDEFKHFFSKYGKIVEHQII 139

Query: 102 RDHETNRSRGFGFVIFDSEEVVDELLSNGNMIDM 1
           RDHETNRSRGFGF++F+ EEVVDE+LS GNMIDM
Sbjct: 140 RDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDM 173



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
 Frame = -3

Query: 462 KIFIGGLPKDTQYNAFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 283
           KIF+GG+P     + F   F KYG I +  I++D  T + RGFGFI + +  VVD+++  
Sbjct: 108 KIFVGGIPSTVTEDEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSK 167

Query: 282 THV--FNGKQVEIKRTIPKGSA 223
            ++   +G QVEIK+  PK S+
Sbjct: 168 GNMIDMSGTQVEIKKAEPKKSS 189


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