BLASTX nr result

ID: Atractylodes22_contig00036404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036404
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR00617.1| hypothetical protein [Oryza sativa Japonica Group...    39   1e-05

>gb|AAR00617.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|108709800|gb|ABF97595.1| transposon protein,
           putative, Mutator sub-class [Oryza sativa Japonica
           Group]
          Length = 981

 Score = 38.9 bits (89), Expect(2) = 1e-05
 Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 6/134 (4%)
 Frame = -3

Query: 513 KQRWKEKACKDLLW*RATAPIFPQFQTSMEDLKGSMSSVMNG*SRPPSPSTLEQISFHR- 337
           +Q +K +  K+ LW  A +    ++ T  E++K       N   +  +P+T  +  F   
Sbjct: 574 QQSFKGEILKNQLWACARSSSVQEWNTKFEEMKALNEDAYNWLEQM-APNTWVRAFFSDF 632

Query: 336 -----LMSP*CAS*QHM*SRQLFEGGGKPIIST*EYIREFLMKRIVNVQRVRDRCDGPLT 172
                L++  C     + ++ + E    PI++  E I+  LM R  N Q+   +  GP+ 
Sbjct: 633 PKCDILLNNSC----EVFNKYILEAREMPILTMLEKIKGQLMTRFFNKQKEAQKWQGPIC 688

Query: 171 PTVTKLMNKIKEEA 130
           P + K + KI E+A
Sbjct: 689 PKIRKKLLKIAEQA 702



 Score = 35.0 bits (79), Expect(2) = 1e-05
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -1

Query: 65  IVDMNAKTCTCRKWELTALPC 3
           IVD+  K C CR+W+LT +PC
Sbjct: 725 IVDVVTKHCDCRRWDLTGIPC 745


Top