BLASTX nr result

ID: Atractylodes22_contig00036396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036396
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...    75   7e-12
emb|CBI23315.3| unnamed protein product [Vitis vinifera]               75   7e-12
emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]    75   7e-12
ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g...    67   1e-09

>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
           vinifera]
          Length = 610

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
 Frame = +1

Query: 4   TGTLSKRWEYLWTSVPNLIFQHKYDKRPHSDFVLFVAKTLTQCRQLKLRKFVVNIEYDIR 183
           T  LSKRW++LWT VPNL+F+ +   R    FV  + KTL   +  +++KF+++  Y  +
Sbjct: 99  TSILSKRWQFLWTMVPNLVFRFR---RRDEHFVNSIDKTLVLHQNSQIKKFLIDFTYQSQ 155

Query: 184 FESQVNNWIRYAMICNVEELDLS------LGNLDSEAVFPLDEYFFVNSCFTDL 327
           F+S VN WIR+A   NVEEL L       + +   +    L ++ + NS    L
Sbjct: 156 FQSSVNVWIRHATRKNVEELHLQFRVGQHIRSSPMDYAHALPQFLYANSSIVKL 209


>emb|CBI23315.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
 Frame = +1

Query: 4   TGTLSKRWEYLWTSVPNLIFQHKYDKRPHSDFVLFVAKTLTQCRQLKLRKFVVNIEYDIR 183
           T  LSKRW++LWT VPNL+F+ +   R    FV  + KTL   +  +++KF+++  Y  +
Sbjct: 7   TSILSKRWQFLWTMVPNLVFRFR---RRDEHFVNSIDKTLVLHQNSQIKKFLIDFTYQSQ 63

Query: 184 FESQVNNWIRYAMICNVEELDLS------LGNLDSEAVFPLDEYFFVNSCFTDL 327
           F+S VN WIR+A   NVEEL L       + +   +    L ++ + NS    L
Sbjct: 64  FQSSVNVWIRHATRKNVEELHLQFRVGQHIRSSPMDYAHALPQFLYANSSIVKL 117


>emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]
          Length = 891

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
 Frame = +1

Query: 4   TGTLSKRWEYLWTSVPNLIFQHKYDKRPHSDFVLFVAKTLTQCRQLKLRKFVVNIEYDIR 183
           T  LSKRW++LWT VPNL+F+ +   R    FV  + KTL   +  +++KF+++  Y  +
Sbjct: 99  TSILSKRWQFLWTMVPNLVFRFR---RRDEHFVNSIDKTLVLHQNSQIKKFLIDFTYQSQ 155

Query: 184 FESQVNNWIRYAMICNVEELDLS------LGNLDSEAVFPLDEYFFVNSCFTDL 327
           F+S VN WIR+A   NVEEL L       + +   +    L ++ + NS    L
Sbjct: 156 FQSSVNVWIRHATRKNVEELHLQFRVGQHIRSSPMDYAHALPQFLYANSSIVKL 209


>ref|XP_002300142.1| f-box family protein [Populus trichocarpa]
           gi|222847400|gb|EEE84947.1| f-box family protein
           [Populus trichocarpa]
          Length = 481

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1   RTGTLSKRWEYLWTSVPNLIFQHKYD-KRPHSDFVLFVAKTLTQCRQLKLRKFVVNIEYD 177
           +T  LSKRW+ +WT VPNLIF+ +    +   +F +FV K L      K++KF+V  E+ 
Sbjct: 69  KTCILSKRWDSIWTLVPNLIFRRECSCSQEAENFAVFVDKALMHYCSPKVKKFLVEFEFT 128

Query: 178 IRFESQVNNWIRYAMICNVEELDLSLGNLDSEAVFPLDEYFFVNSCFTDL 327
             F++QV++W+ +A+   VEEL L       E     D Y+  N  ++++
Sbjct: 129 ECFKAQVDSWVDFAVRLKVEELCL---EFHREIADDPDYYYLPNFLYSNI 175


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