BLASTX nr result

ID: Atractylodes22_contig00036389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036389
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32741.1| hypothetical protein MtrDRAFT_AC150777g16v1 [Medi...    90   3e-24
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                  82   2e-20
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...    77   3e-18
emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]    72   5e-17
gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]              72   6e-17

>gb|ABD32741.1| hypothetical protein MtrDRAFT_AC150777g16v1 [Medicago truncatula]
          Length = 187

 Score = 89.7 bits (221), Expect(2) = 3e-24
 Identities = 41/63 (65%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
 Frame = +3

Query: 96  LFHFSICTKYKDDVWCDV-AMDACHLLLGRPWEYDRNVNHNGRANTYSFLSGGVKITLVP 272
           L  FSI  KYKD+VWCDV +MDACH+LLGRPW+YDR+  ++G ANTY+F+  GVKI LVP
Sbjct: 34  LVSFSIGQKYKDNVWCDVISMDACHMLLGRPWQYDRHALYDGHANTYTFVKYGVKIKLVP 93

Query: 273 SKP 281
             P
Sbjct: 94  LPP 96



 Score = 47.0 bits (110), Expect(2) = 3e-24
 Identities = 22/35 (62%), Positives = 26/35 (74%)
 Frame = +2

Query: 2   QKLALKTENHPKPY*LQWLKKGGEVTISKQALVSF 106
           +KL L T++HP  Y LQWLKKG EV +SK  LVSF
Sbjct: 3   EKLELPTKDHPHRYKLQWLKKGNEVRVSKCCLVSF 37


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score = 81.6 bits (200), Expect(2) = 2e-20
 Identities = 38/66 (57%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = +3

Query: 96  LFHFSICTKYKDDVWCDVA--MDACHLLLGRPWEYDRNVNHNGRANTYSFLSGGVKITLV 269
           +  FSI   YKD+V CDV   MDACHLLLGRPWEYDRN  H G+ N Y F   G K+TL 
Sbjct: 461 IISFSIGKMYKDEVLCDVVVPMDACHLLLGRPWEYDRNTTHQGKDNVYIFKHQGKKVTLT 520

Query: 270 PSKPKE 287
           P  P +
Sbjct: 521 PLPPNQ 526



 Score = 42.0 bits (97), Expect(2) = 2e-20
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = +2

Query: 5   KLALKTENHPKPY*LQWLKKGGEVTISKQALVSF 106
           KL L T+ HP PY L+WL K   V + KQ ++SF
Sbjct: 431 KLGLPTQEHPNPYKLRWLSKDSGVRVDKQCIISF 464


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score = 77.4 bits (189), Expect(2) = 3e-18
 Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = +3

Query: 120 KYKDDVWCDVA-MDACHLLLGRPWEYDRNVNHNGRANTYSFLSGGVKITLVPSKPKEI 290
           KY+DDV CDV  M ACH+LLGRPW+YDR+  H+G+ N Y+   GG K TL P  PKE+
Sbjct: 473 KYQDDVLCDVIPMHACHILLGRPWQYDRDTLHHGKTNKYTIHKGGKKYTLTPLAPKEV 530



 Score = 39.3 bits (90), Expect(2) = 3e-18
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = +2

Query: 8   LALKTENHPKPY*LQWLKKGGEVTISKQALVS 103
           + + T  HP+PY LQWL   GE+ + KQAL+S
Sbjct: 437 MKIPTIQHPQPYKLQWLNDDGELKVHKQALIS 468


>emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]
          Length = 818

 Score = 72.4 bits (176), Expect(2) = 5e-17
 Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = +3

Query: 90  KLLFHFSICTKYKDDVWCDVA-MDACHLLLGRPWEYDRNVNHNGRANTYSFLSGGVKITL 266
           ++L  FSI  +YKD+V CD+  M A H+LLGRPW++DR VNH+G  N YSF+     ITL
Sbjct: 475 EVLVSFSI-GRYKDEVLCDIVPMHAGHILLGRPWQFDRKVNHDGFKNRYSFIKNNKTITL 533

Query: 267 VPSKPKE 287
           VP  P++
Sbjct: 534 VPLTPRQ 540



 Score = 40.0 bits (92), Expect(2) = 5e-17
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +2

Query: 2   QKLALKTENHPKPY*LQWLKKGGEVTISKQALVSF 106
           + L L T  HP+PY LQWL   GE  ++K+ LVSF
Sbjct: 446 ENLNLPTLKHPRPYKLQWLNDFGEDKVNKEVLVSF 480


>gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 572

 Score = 71.6 bits (174), Expect(2) = 6e-17
 Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +3

Query: 120 KYKDDVWCDVA-MDACHLLLGRPWEYDRNVNHNGRANTYSFLSGGVKITLVPSKPKEI 290
           KY+D V CDV  M+A HLLLGRPW++DR  NH+G +N YSF+    KI LVP  P E+
Sbjct: 434 KYEDVVLCDVVPMEASHLLLGRPWQFDRKANHDGYSNKYSFMYHDQKINLVPLNPSEV 491



 Score = 40.4 bits (93), Expect(2) = 6e-17
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +2

Query: 5   KLALKTENHPKPY*LQWLKKGGEVTISKQALVSF 106
           KL L+T+ HPKPY LQWL +  E+ ++KQ  + F
Sbjct: 397 KLKLETKPHPKPYKLQWLNESVEMLVNKQVEICF 430


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