BLASTX nr result

ID: Atractylodes22_contig00036347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036347
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABS87383.1| minichromosome maintenance factor [Lactuca sativa]     123   2e-26
ref|XP_002273675.1| PREDICTED: DNA replication licensing factor ...    77   1e-12
ref|XP_002512698.1| DNA replication licensing factor MCM2, putat...    65   4e-09
ref|NP_175112.2| minichromosome maintenance protein 2 [Arabidops...    64   2e-08
ref|NP_001185154.1| minichromosome maintenance protein 2 [Arabid...    64   2e-08

>gb|ABS87383.1| minichromosome maintenance factor [Lactuca sativa]
          Length = 977

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/92 (67%), Positives = 66/92 (71%)
 Frame = +1

Query: 1   PSSSDQAGNLNSSQFNGNPPSTPDSPTSAGFNTDQLPFNTSRTSENYSDYDDDEAXXXXX 180
           P+SSDQ GN NSSQFNGNPPSTPDSPTSAGFNTDQLPFN SRTSENYSD+DDDEA     
Sbjct: 16  PASSDQGGNPNSSQFNGNPPSTPDSPTSAGFNTDQLPFN-SRTSENYSDFDDDEAAVDPN 74

Query: 181 XXXXXXXXXXXXXXXXXXLFNDNYIEDYRRME 276
                             LFNDNYI+DYRRM+
Sbjct: 75  IIRDELDDGDEDEGEGEDLFNDNYIDDYRRMD 106


>ref|XP_002273675.1| PREDICTED: DNA replication licensing factor mcm2 [Vitis vinifera]
           gi|296085553|emb|CBI29285.3| unnamed protein product
           [Vitis vinifera]
          Length = 954

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 49/92 (53%), Positives = 56/92 (60%)
 Frame = +1

Query: 1   PSSSDQAGNLNSSQFNGNPPSTPDSPTSAGFNTDQLPFNTSRTSENYSDYDDDEAXXXXX 180
           PS SD AGN      +GNPPSTPDSPTSAGFNTDQLP   SRTSENYS  D+DEA     
Sbjct: 14  PSDSD-AGN------SGNPPSTPDSPTSAGFNTDQLP--PSRTSENYS--DEDEA-AVDP 61

Query: 181 XXXXXXXXXXXXXXXXXXLFNDNYIEDYRRME 276
                             L+NDN+++DYRRM+
Sbjct: 62  HIIRDEPEDVEDEEEGEDLYNDNFMDDYRRMD 93


>ref|XP_002512698.1| DNA replication licensing factor MCM2, putative [Ricinus communis]
           gi|223548659|gb|EEF50150.1| DNA replication licensing
           factor MCM2, putative [Ricinus communis]
          Length = 930

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/72 (50%), Positives = 43/72 (59%)
 Frame = +1

Query: 61  STPDSPTSAGFNTDQLPFNTSRTSENYSDYDDDEAXXXXXXXXXXXXXXXXXXXXXXXLF 240
           S P+SPTSAGFNTDQLP N   TS+N++D DDDEA                       LF
Sbjct: 5   SPPESPTSAGFNTDQLPHN---TSQNFTD-DDDEASVDPEIIRDEPDEPQEEEEEGEDLF 60

Query: 241 NDNYIEDYRRME 276
           NDN+++DYRRME
Sbjct: 61  NDNFMDDYRRME 72


>ref|NP_175112.2| minichromosome maintenance protein 2 [Arabidopsis thaliana]
           gi|8656002|gb|AAF78275.1|AC020576_19 Contains similarity
           to a MCM2-related protein from Arabidopsis thaliana
           gb|Y08301 and contains a MCM PF|00493 domain
           [Arabidopsis thaliana] gi|332193939|gb|AEE32060.1|
           minichromosome maintenance protein 2 [Arabidopsis
           thaliana]
          Length = 936

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/75 (42%), Positives = 44/75 (58%)
 Frame = +1

Query: 52  NPPSTPDSPTSAGFNTDQLPFNTSRTSENYSDYDDDEAXXXXXXXXXXXXXXXXXXXXXX 231
           N PS+P SP+SAGFNTDQLP +TS+ SEN+SD +++ A                      
Sbjct: 8   NEPSSPASPSSAGFNTDQLPISTSQNSENFSD-EEEAAVDTQVIRDEPDEAEDEEEEEGE 66

Query: 232 XLFNDNYIEDYRRME 276
            LFND ++ DYR+M+
Sbjct: 67  DLFNDTFMNDYRKMD 81


>ref|NP_001185154.1| minichromosome maintenance protein 2 [Arabidopsis thaliana]
           gi|332193940|gb|AEE32061.1| minichromosome maintenance
           protein 2 [Arabidopsis thaliana]
          Length = 934

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/75 (42%), Positives = 44/75 (58%)
 Frame = +1

Query: 52  NPPSTPDSPTSAGFNTDQLPFNTSRTSENYSDYDDDEAXXXXXXXXXXXXXXXXXXXXXX 231
           N PS+P SP+SAGFNTDQLP +TS+ SEN+SD +++ A                      
Sbjct: 8   NEPSSPASPSSAGFNTDQLPISTSQNSENFSD-EEEAAVDTQVIRDEPDEAEDEEEEEGE 66

Query: 232 XLFNDNYIEDYRRME 276
            LFND ++ DYR+M+
Sbjct: 67  DLFNDTFMNDYRKMD 81


Top