BLASTX nr result

ID: Atractylodes22_contig00036324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036324
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...   294   2e-77
emb|CBI22513.3| unnamed protein product [Vitis vinifera]              294   2e-77
ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Gly...   282   6e-74
ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, puta...   271   2e-70
ref|NP_001058419.1| Os06g0691000 [Oryza sativa Japonica Group] g...   259   7e-67

>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score =  294 bits (753), Expect = 2e-77
 Identities = 165/294 (56%), Positives = 202/294 (68%), Gaps = 11/294 (3%)
 Frame = -3

Query: 849  LVP---DDPANGPTSSDINISEVSDSAEDIKLPNQESDSLVHDSYNEAKVEEPTFSNNYE 679
            LVP   D    G TS D   SE     E  +  + E D    ++ NE  +E+P FSN+ +
Sbjct: 222  LVPETEDSVFKGGTSKDAVSSEGGQYLEYTRQSSGEIDDHQCENTNETIIEKP-FSNDEK 280

Query: 678  ------KEVAETNEVVRDMPLAEMQSKCSPCQPSASESSRCSD-IQNITESSSMQGFSNK 520
                  +E + +N+        E+QS  SP +PSAS SS   D  +  + S+++ G SNK
Sbjct: 281  SSEIKMEEQSFSNQEEECSIKNELQS--SPHRPSASVSSYYLDNARKESSSTTVVGCSNK 338

Query: 519  GRSTSVDPNFVETYFKNSRLHFIGTWRNRYRKRFPXXXXXXXXXXXXS-ASSTCQRNTVI 343
            G ST  DPNFVE YFK SRLHFIGTWRNRY+KRFP              AS   Q+N +I
Sbjct: 339  GHSTLEDPNFVENYFKYSRLHFIGTWRNRYQKRFPRLSNEFKHTSSDLNASGVSQKNVII 398

Query: 342  HVDMDCFFVSVVIRNHPELWDKPVAVCHSDNPRGTSEISSANYPARDHGVRAGIFVRDAK 163
            H+DMDCFFVSVVIRN+PEL DKPVAVCHS+NP+GT+EISSANYPARD+GV+AGIFVRDAK
Sbjct: 399  HMDMDCFFVSVVIRNNPELQDKPVAVCHSNNPKGTAEISSANYPARDYGVKAGIFVRDAK 458

Query: 162  ALCPHLVIIPYDFEAYKEVADRFYSILHKHCNKVQAMSCDEAILDISDLEVDDP 1
            ALCPHLVI PY+FEAY+EVAD+FY+ILHKHCNKVQA+SCDEA L++ D +  DP
Sbjct: 459  ALCPHLVIFPYNFEAYEEVADQFYNILHKHCNKVQAVSCDEAFLEVMDSKEGDP 512


>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score =  294 bits (752), Expect = 2e-77
 Identities = 159/285 (55%), Positives = 200/285 (70%), Gaps = 2/285 (0%)
 Frame = -3

Query: 849  LVPDDPANGPTSSDINISEVSDSAEDIKLPNQESDSLVHDSYNEAKVEEPTFSNNYEKEV 670
            LVP+   +  +S +I+  +  ++ E I      +D    +  +E K+EE +FSN  E+E 
Sbjct: 222  LVPETEDSVQSSGEIDDHQCENTNETIIEKPFSND----EKSSEIKMEEQSFSNQ-EEEC 276

Query: 669  AETNEVVRDMPLAEMQSKCSPCQPSASESSRCSD-IQNITESSSMQGFSNKGRSTSVDPN 493
            +  NE+           + SP +PSAS SS   D  +  + S+++ G SNKG ST  DPN
Sbjct: 277  SIKNEL-----------QSSPHRPSASVSSYYLDNARKESSSTTVVGCSNKGHSTLEDPN 325

Query: 492  FVETYFKNSRLHFIGTWRNRYRKRFPXXXXXXXXXXXXS-ASSTCQRNTVIHVDMDCFFV 316
            FVE YFK SRLHFIGTWRNRY+KRFP              AS   Q+N +IH+DMDCFFV
Sbjct: 326  FVENYFKYSRLHFIGTWRNRYQKRFPRLSNEFKHTSSDLNASGVSQKNVIIHMDMDCFFV 385

Query: 315  SVVIRNHPELWDKPVAVCHSDNPRGTSEISSANYPARDHGVRAGIFVRDAKALCPHLVII 136
            SVVIRN+PEL DKPVAVCHS+NP+GT+EISSANYPARD+GV+AGIFVRDAKALCPHLVI 
Sbjct: 386  SVVIRNNPELQDKPVAVCHSNNPKGTAEISSANYPARDYGVKAGIFVRDAKALCPHLVIF 445

Query: 135  PYDFEAYKEVADRFYSILHKHCNKVQAMSCDEAILDISDLEVDDP 1
            PY+FEAY+EVAD+FY+ILHKHCNKVQA+SCDEA L++ D +  DP
Sbjct: 446  PYNFEAYEEVADQFYNILHKHCNKVQAVSCDEAFLEVMDSKEGDP 490


>ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Glycine max]
          Length = 1115

 Score =  282 bits (722), Expect = 6e-74
 Identities = 150/275 (54%), Positives = 187/275 (68%), Gaps = 3/275 (1%)
 Frame = -3

Query: 816  SSDINISEVSDSAEDIKLPNQESDSLVHDSYNEAKVEEPTFSNNYEKEVAETNEVVRDMP 637
            S D + S+V D +E     + ESD  + ++ N   +EE T   +  +    +N   +D  
Sbjct: 224  SEDRHSSKVGDMSELSGQISTESDDTIPENTNAIMMEELT---SVREHAGGSNAATKDER 280

Query: 636  LAEMQSKCSPCQPSASESSRCSDIQNITESSSMQGF--SNKGRSTSVDPNFVETYFKNSR 463
              + + + +   PS S S+ CSD  N+ E  +  G   S +  ST  DPNFVE YFK+SR
Sbjct: 281  NVKGELEPAHQAPSTSFSTPCSDELNVKEYPNSSGTKPSKQCHSTLADPNFVENYFKSSR 340

Query: 462  LHFIGTWRNRYRKRFPXXXXXXXXXXXXSASSTCQRNTVI-HVDMDCFFVSVVIRNHPEL 286
            LHFIGTWRNRYRKRFP            +++S    N+VI HVDMDCFFVSVVIRNHPEL
Sbjct: 341  LHFIGTWRNRYRKRFPTLSTGFNNESANNSASDISHNSVIIHVDMDCFFVSVVIRNHPEL 400

Query: 285  WDKPVAVCHSDNPRGTSEISSANYPARDHGVRAGIFVRDAKALCPHLVIIPYDFEAYKEV 106
              +PVAVCHS+N  GT+EISSANYPAR HG+RAG+FVRDAKALCPHLVI PY+FEAY+EV
Sbjct: 401  LGQPVAVCHSNNSNGTAEISSANYPARSHGIRAGMFVRDAKALCPHLVIFPYNFEAYEEV 460

Query: 105  ADRFYSILHKHCNKVQAMSCDEAILDISDLEVDDP 1
            AD+FYSILH+ C KVQA+SCDEA LD +D EV+DP
Sbjct: 461  ADQFYSILHQRCKKVQAVSCDEAFLDATDSEVEDP 495


>ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis]
            gi|223542041|gb|EEF43585.1| terminal deoxycytidyl
            transferase rev1, putative [Ricinus communis]
          Length = 1200

 Score =  271 bits (692), Expect = 2e-70
 Identities = 147/284 (51%), Positives = 185/284 (65%), Gaps = 4/284 (1%)
 Frame = -3

Query: 840  DDPANGPTSSDINISEVSDSAEDIKLPNQESDSLVHDSYNEAKVEEPTFSNNYEKEVA-- 667
            D    G TS D N+ EV+D  +  K  + + D      Y + ++EE +  ++   E+   
Sbjct: 216  DPSLKGGTSQDTNLPEVNDPVKYGKPIDGQFD------YPDCEIEETSSRSSKSSELRIE 269

Query: 666  -ETNEVVRDMPLAEMQSKCSPCQPSASESSRCSDIQNITESSSMQGFSNKGRSTSVDPNF 490
              +N    +    E+QS           S R   I++ T + ++   SN   ST  DPNF
Sbjct: 270  EPSNTEGENNVYHELQS-----------SPRDHSIES-TPTPAIARPSNPRHSTLEDPNF 317

Query: 489  VETYFKNSRLHFIGTWRNRYRKRFPXXXXXXXXXXXXS-ASSTCQRNTVIHVDMDCFFVS 313
            VE YFK+SRLHFIGTWRNRYRKRFP              AS    +  ++HVDMDCFFVS
Sbjct: 318  VENYFKSSRLHFIGTWRNRYRKRFPRLSSDFRCRSLTIDASDNSHKTVIMHVDMDCFFVS 377

Query: 312  VVIRNHPELWDKPVAVCHSDNPRGTSEISSANYPARDHGVRAGIFVRDAKALCPHLVIIP 133
            VVIRNHPEL DKPVAVCHSDNP+GT+EISSANYPAR +G++AGIFVRDAKALCP L+I P
Sbjct: 378  VVIRNHPELHDKPVAVCHSDNPKGTAEISSANYPARAYGIKAGIFVRDAKALCPQLIIFP 437

Query: 132  YDFEAYKEVADRFYSILHKHCNKVQAMSCDEAILDISDLEVDDP 1
            Y+F+AY+EVAD+FY++LHKHCNKVQA+SCDEA LDI+D    DP
Sbjct: 438  YNFQAYEEVADQFYNVLHKHCNKVQAVSCDEAFLDITDFSGGDP 481


>ref|NP_001058419.1| Os06g0691000 [Oryza sativa Japonica Group]
            gi|52076718|dbj|BAD45631.1| putative deoxycytidyl
            transferase [Oryza sativa Japonica Group]
            gi|53793286|dbj|BAD54508.1| putative deoxycytidyl
            transferase [Oryza sativa Japonica Group]
            gi|113596459|dbj|BAF20333.1| Os06g0691000 [Oryza sativa
            Japonica Group]
          Length = 1125

 Score =  259 bits (661), Expect = 7e-67
 Identities = 137/258 (53%), Positives = 171/258 (66%), Gaps = 9/258 (3%)
 Frame = -3

Query: 747  DSLVHDSYNEAKVEEPTFS-------NNYEKEVAET--NEVVRDMPLAEMQSKCSPCQPS 595
            DSL  D +  +  EE           N YE   +E   N++   + +AE     S C   
Sbjct: 239  DSLSSDDHKASMFEEQDSEDFVDEAGNAYETACSERRDNDMDGKLHVAESPDIRSRCSNL 298

Query: 594  ASESSRCSDIQNITESSSMQGFSNKGRSTSVDPNFVETYFKNSRLHFIGTWRNRYRKRFP 415
             S SS  S +   +   +    S++  ST  DPNFVE YFK SRLHFIGTWRNRYRKRF 
Sbjct: 299  CSTSSTGSHLSLDSLDRNATKSSSRTHSTLTDPNFVENYFKYSRLHFIGTWRNRYRKRFS 358

Query: 414  XXXXXXXXXXXXSASSTCQRNTVIHVDMDCFFVSVVIRNHPELWDKPVAVCHSDNPRGTS 235
                          S   + NT+IH+DMDCFFVSVVIRN PEL DKPVAVCHSDNP+GT+
Sbjct: 359  NLLGDKSSKGNRDHSG--KNNTIIHIDMDCFFVSVVIRNKPELHDKPVAVCHSDNPKGTA 416

Query: 234  EISSANYPARDHGVRAGIFVRDAKALCPHLVIIPYDFEAYKEVADRFYSILHKHCNKVQA 55
            EISSANYPAR++G++AG+FVR+AKA CPHL+I+PYDF+AY EVAD+FY ILHK+C+KVQA
Sbjct: 417  EISSANYPARNYGIKAGMFVREAKARCPHLMIVPYDFDAYGEVADQFYGILHKYCSKVQA 476

Query: 54   MSCDEAILDISDLEVDDP 1
            +SCDEA LD+++   D+P
Sbjct: 477  LSCDEAFLDMTECLHDNP 494


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