BLASTX nr result

ID: Atractylodes22_contig00036316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036316
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinu...   100   2e-19
ref|XP_002300931.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
emb|CBI35500.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246...    95   5e-18
ref|XP_002307488.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18

>ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
            gi|223534503|gb|EEF36202.1| Ran GTPase binding protein,
            putative [Ricinus communis]
          Length = 1114

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/57 (80%), Positives = 52/57 (91%)
 Frame = -3

Query: 335  KRVRFSRRRFGEHQAETWWSENREKVYERYNVRGSDKSSVSSQTTRRSGESLATSTQ 165
            KRVRFSRRRFGEHQAETWWSENREKVYE+YNVRGSDKSSVS Q  RRS  ++++S+Q
Sbjct: 1057 KRVRFSRRRFGEHQAETWWSENREKVYEKYNVRGSDKSSVSGQAARRSEGAMSSSSQ 1113


>ref|XP_002300931.1| predicted protein [Populus trichocarpa] gi|222842657|gb|EEE80204.1|
            predicted protein [Populus trichocarpa]
          Length = 1114

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 44/56 (78%), Positives = 50/56 (89%)
 Frame = -3

Query: 335  KRVRFSRRRFGEHQAETWWSENREKVYERYNVRGSDKSSVSSQTTRRSGESLATST 168
            KRVRFSRRRFGEHQAETWWSENREKVYE+YNVRGSDKSSVS Q  RRS   +++++
Sbjct: 1057 KRVRFSRRRFGEHQAETWWSENREKVYEKYNVRGSDKSSVSGQAARRSEGGMSSAS 1112


>emb|CBI35500.3| unnamed protein product [Vitis vinifera]
          Length = 910

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/57 (78%), Positives = 48/57 (84%)
 Frame = -3

Query: 335  KRVRFSRRRFGEHQAETWWSENREKVYERYNVRGSDKSSVSSQTTRRSGESLATSTQ 165
            KRVRFSRRRFGEHQAE WWSENREKVYERYNVRGSDKSSVS Q  RRS    + S++
Sbjct: 853  KRVRFSRRRFGEHQAENWWSENREKVYERYNVRGSDKSSVSGQAARRSEGGTSPSSR 909


>ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
          Length = 1129

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/57 (78%), Positives = 48/57 (84%)
 Frame = -3

Query: 335  KRVRFSRRRFGEHQAETWWSENREKVYERYNVRGSDKSSVSSQTTRRSGESLATSTQ 165
            KRVRFSRRRFGEHQAE WWSENREKVYERYNVRGSDKSSVS Q  RRS    + S++
Sbjct: 1072 KRVRFSRRRFGEHQAENWWSENREKVYERYNVRGSDKSSVSGQAARRSEGGTSPSSR 1128


>ref|XP_002307488.1| predicted protein [Populus trichocarpa] gi|222856937|gb|EEE94484.1|
            predicted protein [Populus trichocarpa]
          Length = 1061

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/56 (76%), Positives = 50/56 (89%)
 Frame = -3

Query: 335  KRVRFSRRRFGEHQAETWWSENREKVYERYNVRGSDKSSVSSQTTRRSGESLATST 168
            KRVRFSRRRFGEHQAETWWSENREKVYE+YNV+GSDKSSV+ Q  RRS   +++S+
Sbjct: 1004 KRVRFSRRRFGEHQAETWWSENREKVYEKYNVKGSDKSSVTGQAARRSEGGMSSSS 1059


Top