BLASTX nr result

ID: Atractylodes22_contig00036146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036146
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331281.1| f-box family protein [Populus trichocarpa] g...   158   4e-37
ref|XP_002330962.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-36
ref|XP_002278501.1| PREDICTED: F-box/kelch-repeat protein At5g15...   152   3e-35
emb|CAN83202.1| hypothetical protein VITISV_035685 [Vitis vinifera]   152   3e-35
gb|ABD96837.1| hypothetical protein [Cleome spinosa]                  152   4e-35

>ref|XP_002331281.1| f-box family protein [Populus trichocarpa]
           gi|222873706|gb|EEF10837.1| f-box family protein
           [Populus trichocarpa]
          Length = 452

 Score =  158 bits (400), Expect = 4e-37
 Identities = 80/106 (75%), Positives = 89/106 (83%), Gaps = 2/106 (1%)
 Frame = +3

Query: 72  SHEEDEG--RQLNYFGGSSSRNTSPIGRGLGLRNTSPCRQKVIKTKPRGLDEEMIATFAK 245
           +H+ D+G  RQ++      SRNTSP+GR +GLRNTSP RQKVIKTKPRGLDEE IATF K
Sbjct: 25  AHDIDDGCPRQVSPVRIDGSRNTSPMGR-VGLRNTSPSRQKVIKTKPRGLDEETIATFGK 83

Query: 246 APHPDVHMEDNIWAMLPEDLLNEILARVPPFMIFRLRSVCKRWNSI 383
             HPD+ MED+IWAMLPEDLLNEIL RVPPFMIFRLRSVCKRWNSI
Sbjct: 84  VVHPDIQMEDSIWAMLPEDLLNEILVRVPPFMIFRLRSVCKRWNSI 129


>ref|XP_002330962.1| predicted protein [Populus trichocarpa] gi|222873156|gb|EEF10287.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  155 bits (391), Expect = 4e-36
 Identities = 81/113 (71%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
 Frame = +3

Query: 48  AELTRTGCSHEEDE-GRQLNYFGGSSSRNTSPIGRGLGLRNTSPCRQKVIKTKPRGLDEE 224
           A   + G  H++D   RQ++      SRNTSPIG  +G RNTSP RQKVIKTKPRGLDEE
Sbjct: 18  AHSLKNGGLHDDDGCPRQVSPIRIGGSRNTSPIGC-VGSRNTSPSRQKVIKTKPRGLDEE 76

Query: 225 MIATFAKAPHPDVHMEDNIWAMLPEDLLNEILARVPPFMIFRLRSVCKRWNSI 383
            +ATF K  HPDV MEDNIWAMLPEDLLNEIL RVPPFMIFRLRSVCKRWNSI
Sbjct: 77  TVATFGKVVHPDVQMEDNIWAMLPEDLLNEILLRVPPFMIFRLRSVCKRWNSI 129


>ref|XP_002278501.1| PREDICTED: F-box/kelch-repeat protein At5g15710 [Vitis vinifera]
           gi|298204433|emb|CBI16913.3| unnamed protein product
           [Vitis vinifera]
          Length = 437

 Score =  152 bits (384), Expect = 3e-35
 Identities = 80/112 (71%), Positives = 89/112 (79%), Gaps = 1/112 (0%)
 Frame = +3

Query: 51  ELTRTGCSHEEDEG-RQLNYFGGSSSRNTSPIGRGLGLRNTSPCRQKVIKTKPRGLDEEM 227
           +L+R G   EE+   + ++  GG  SRNTSP+GR +G RNTSP RQKVIKT PRGLDEE 
Sbjct: 18  QLSRNGFYREEESCVKHVSALGGGGSRNTSPLGR-VGSRNTSPSRQKVIKT-PRGLDEET 75

Query: 228 IATFAKAPHPDVHMEDNIWAMLPEDLLNEILARVPPFMIFRLRSVCKRWNSI 383
           + TF KA  PDV MEDNIWAMLPEDLL EILARVPPFMIFRLRSVCKRWNSI
Sbjct: 76  VTTFGKAVQPDVQMEDNIWAMLPEDLLIEILARVPPFMIFRLRSVCKRWNSI 127


>emb|CAN83202.1| hypothetical protein VITISV_035685 [Vitis vinifera]
          Length = 437

 Score =  152 bits (384), Expect = 3e-35
 Identities = 80/112 (71%), Positives = 89/112 (79%), Gaps = 1/112 (0%)
 Frame = +3

Query: 51  ELTRTGCSHEEDEG-RQLNYFGGSSSRNTSPIGRGLGLRNTSPCRQKVIKTKPRGLDEEM 227
           +L+R G   EE+   + ++  GG  SRNTSP+GR +G RNTSP RQKVIKT PRGLDEE 
Sbjct: 18  QLSRNGFYREEESCVKHVSALGGGGSRNTSPLGR-VGSRNTSPSRQKVIKT-PRGLDEET 75

Query: 228 IATFAKAPHPDVHMEDNIWAMLPEDLLNEILARVPPFMIFRLRSVCKRWNSI 383
           + TF KA  PDV MEDNIWAMLPEDLL EILARVPPFMIFRLRSVCKRWNSI
Sbjct: 76  VTTFGKAVQPDVQMEDNIWAMLPEDLLIEILARVPPFMIFRLRSVCKRWNSI 127


>gb|ABD96837.1| hypothetical protein [Cleome spinosa]
          Length = 439

 Score =  152 bits (383), Expect = 4e-35
 Identities = 80/111 (72%), Positives = 89/111 (80%), Gaps = 2/111 (1%)
 Frame = +3

Query: 57  TRTGCSHEEDEGRQ-LNYFGGSSSRNTSPIGRGLGLRNTSPCRQKVIKTKPRGLDEE-MI 230
           TR+G S  E+  RQ ++      SRNTSP GR +G RNTSP R+KV+KTKPRGLDEE  +
Sbjct: 20  TRSGISGNEESSRQQVSPMRTVGSRNTSPSGR-VGSRNTSPSRKKVVKTKPRGLDEEETV 78

Query: 231 ATFAKAPHPDVHMEDNIWAMLPEDLLNEILARVPPFMIFRLRSVCKRWNSI 383
           ATF K  HPDV MED+IWAMLPEDLLNEILARVPPFMIFRLRSVCKRWNSI
Sbjct: 79  ATFGKPAHPDVQMEDSIWAMLPEDLLNEILARVPPFMIFRLRSVCKRWNSI 129


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