BLASTX nr result

ID: Atractylodes22_contig00036108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036108
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein lig...   173   1e-41
emb|CBI30594.3| unnamed protein product [Vitis vinifera]              173   1e-41
ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|2...   158   4e-37
ref|XP_002509447.1| ring finger protein, putative [Ricinus commu...   154   9e-36
ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34

>ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Vitis
           vinifera]
          Length = 534

 Score =  173 bits (438), Expect = 1e-41
 Identities = 83/142 (58%), Positives = 108/142 (76%), Gaps = 3/142 (2%)
 Frame = +2

Query: 2   DEPSTEVRPKRYKRWAGSQSSLPSSGA---NGGCDDNEAEATRKTVGVSIGLVGSSEMLA 172
           ++ S EV+PKR +RW G + S PSSGA   +GG D+N+ E  R+ +G S GLVG+SE+LA
Sbjct: 322 EDHSAEVKPKRSRRWGGVRFSQPSSGAANADGGGDENDLEPNREAMGASAGLVGNSEILA 381

Query: 173 WGGGGMRSHTRHGSQNSNSGKNTRNSQLTKLIDHLQKLPQNDDKLDIHLKLVSLDEQNIP 352
           WG GGMRSHTR+GS +  +GKN R+S+L+KL+D+L+ L QNDD+LDIHL LVSLDEQ IP
Sbjct: 382 WGKGGMRSHTRYGSVSGGNGKNARSSRLSKLVDYLRNLDQNDDELDIHLMLVSLDEQRIP 441

Query: 353 NLQNSYLCCSLAMSTTSVCQYV 418
           +LQ  YLCC   +S   +CQYV
Sbjct: 442 SLQTPYLCCRPTLSVRHLCQYV 463


>emb|CBI30594.3| unnamed protein product [Vitis vinifera]
          Length = 433

 Score =  173 bits (438), Expect = 1e-41
 Identities = 83/142 (58%), Positives = 108/142 (76%), Gaps = 3/142 (2%)
 Frame = +2

Query: 2   DEPSTEVRPKRYKRWAGSQSSLPSSGA---NGGCDDNEAEATRKTVGVSIGLVGSSEMLA 172
           ++ S EV+PKR +RW G + S PSSGA   +GG D+N+ E  R+ +G S GLVG+SE+LA
Sbjct: 221 EDHSAEVKPKRSRRWGGVRFSQPSSGAANADGGGDENDLEPNREAMGASAGLVGNSEILA 280

Query: 173 WGGGGMRSHTRHGSQNSNSGKNTRNSQLTKLIDHLQKLPQNDDKLDIHLKLVSLDEQNIP 352
           WG GGMRSHTR+GS +  +GKN R+S+L+KL+D+L+ L QNDD+LDIHL LVSLDEQ IP
Sbjct: 281 WGKGGMRSHTRYGSVSGGNGKNARSSRLSKLVDYLRNLDQNDDELDIHLMLVSLDEQRIP 340

Query: 353 NLQNSYLCCSLAMSTTSVCQYV 418
           +LQ  YLCC   +S   +CQYV
Sbjct: 341 SLQTPYLCCRPTLSVRHLCQYV 362


>ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|222848746|gb|EEE86293.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score =  158 bits (400), Expect = 4e-37
 Identities = 76/139 (54%), Positives = 105/139 (75%)
 Frame = +2

Query: 2   DEPSTEVRPKRYKRWAGSQSSLPSSGANGGCDDNEAEATRKTVGVSIGLVGSSEMLAWGG 181
           DE S EV+PKR K+WAG++S+  +  A+GG D+N++E  +++VG S GLVGSSE LAWG 
Sbjct: 251 DEHSAEVKPKRCKKWAGARSA--AVNADGGGDENDSEVNKESVGGSSGLVGSSERLAWGK 308

Query: 182 GGMRSHTRHGSQNSNSGKNTRNSQLTKLIDHLQKLPQNDDKLDIHLKLVSLDEQNIPNLQ 361
            GMRSHTR+GS N ++ KN R+S+++KL D+L+ L  ND++LDI+L LVS DEQ +P+LQ
Sbjct: 309 NGMRSHTRYGSANGSNVKNARSSRISKLADYLRNLEGNDNELDINLMLVSFDEQRVPSLQ 368

Query: 362 NSYLCCSLAMSTTSVCQYV 418
             YLCC   +S   +CQYV
Sbjct: 369 RPYLCCRPTLSINKLCQYV 387


>ref|XP_002509447.1| ring finger protein, putative [Ricinus communis]
           gi|223549346|gb|EEF50834.1| ring finger protein,
           putative [Ricinus communis]
          Length = 418

 Score =  154 bits (388), Expect = 9e-36
 Identities = 74/139 (53%), Positives = 103/139 (74%)
 Frame = +2

Query: 2   DEPSTEVRPKRYKRWAGSQSSLPSSGANGGCDDNEAEATRKTVGVSIGLVGSSEMLAWGG 181
           +E S EV+PKR KRW G++S   ++ A+GG D+N++E  R+++G S GLVG SE LAWG 
Sbjct: 201 EEHSAEVKPKRIKRWGGARSG--AANADGGGDENDSEVNRESMGSSAGLVGPSERLAWGR 258

Query: 182 GGMRSHTRHGSQNSNSGKNTRNSQLTKLIDHLQKLPQNDDKLDIHLKLVSLDEQNIPNLQ 361
           GG+RSHTR+GS N+ +GKN RNS++ KL D+L+ L +N+++LDI L LVS DE+ IP+LQ
Sbjct: 259 GGIRSHTRYGSANAGNGKNARNSRIFKLADYLRNLEENNNELDICLMLVSFDEEKIPSLQ 318

Query: 362 NSYLCCSLAMSTTSVCQYV 418
             YLCC   +S   + QYV
Sbjct: 319 RPYLCCRPTLSVKHLRQYV 337


>ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|222870857|gb|EEF07988.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  147 bits (372), Expect = 7e-34
 Identities = 71/139 (51%), Positives = 100/139 (71%)
 Frame = +2

Query: 2   DEPSTEVRPKRYKRWAGSQSSLPSSGANGGCDDNEAEATRKTVGVSIGLVGSSEMLAWGG 181
           DE S EV+PKRY+R + + +      A+G   +N++E  +++VG S GL+ SSE LAWG 
Sbjct: 240 DEHSAEVKPKRYRRCSAAFN------ADGSGGENDSEVNKESVGASAGLISSSERLAWGK 293

Query: 182 GGMRSHTRHGSQNSNSGKNTRNSQLTKLIDHLQKLPQNDDKLDIHLKLVSLDEQNIPNLQ 361
            GMRSHTR+GS N ++ KN RNS+++KL D+L+ L +ND++LDI+L LVS DEQ +P+LQ
Sbjct: 294 NGMRSHTRYGSANGSNVKNARNSRISKLADYLRNLDENDNELDINLMLVSFDEQRVPSLQ 353

Query: 362 NSYLCCSLAMSTTSVCQYV 418
             YLCC   +S  S+CQYV
Sbjct: 354 RPYLCCRPTLSIKSLCQYV 372


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