BLASTX nr result

ID: Atractylodes22_contig00036073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036073
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319745.1| chromodomain protein [Populus trichocarpa] g...    50   3e-07
ref|XP_002523971.1| Heterochromatin protein, putative [Ricinus c...    49   8e-07
ref|XP_002325456.1| chromo domain protein [Populus trichocarpa] ...    48   2e-06

>ref|XP_002319745.1| chromodomain protein [Populus trichocarpa]
           gi|222858121|gb|EEE95668.1| chromodomain protein
           [Populus trichocarpa]
          Length = 438

 Score = 50.4 bits (119), Expect(2) = 3e-07
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -1

Query: 86  PETANTWKLVENLMSCSDVSDAFEESMR 3
           PETANTW+ +ENL SCSDV DAFEES+R
Sbjct: 119 PETANTWEPLENLQSCSDVIDAFEESLR 146



 Score = 28.9 bits (63), Expect(2) = 3e-07
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 175 MVSKEHL*LMEGFHKIEVVHKKRIRKG 95
           +  +E   L EGF +IE + +KR+RKG
Sbjct: 81  LFDEERTKLDEGFFEIEAIRRKRVRKG 107


>ref|XP_002523971.1| Heterochromatin protein, putative [Ricinus communis]
           gi|223536698|gb|EEF38339.1| Heterochromatin protein,
           putative [Ricinus communis]
          Length = 462

 Score = 48.5 bits (114), Expect(2) = 8e-07
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -1

Query: 86  PETANTWKLVENLMSCSDVSDAFEESMR 3
           PE ANTW+ +ENL SCSDV DAFEES+R
Sbjct: 144 PEAANTWEPLENLQSCSDVIDAFEESLR 171



 Score = 29.3 bits (64), Expect(2) = 8e-07
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -2

Query: 172 VSKEHL*LMEGFHKIEVVHKKRIRKG 95
           V +E   L EGF +IE + +KR+RKG
Sbjct: 107 VEEERPKLDEGFFEIEAIRRKRVRKG 132


>ref|XP_002325456.1| chromo domain protein [Populus trichocarpa]
           gi|222862331|gb|EEE99837.1| chromo domain protein
           [Populus trichocarpa]
          Length = 435

 Score = 47.8 bits (112), Expect(2) = 2e-06
 Identities = 20/28 (71%), Positives = 25/28 (89%)
 Frame = -1

Query: 86  PETANTWKLVENLMSCSDVSDAFEESMR 3
           PETANTW+ +ENL SC+DV DAFEES++
Sbjct: 119 PETANTWEPLENLQSCADVIDAFEESLQ 146



 Score = 28.9 bits (63), Expect(2) = 2e-06
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 175 MVSKEHL*LMEGFHKIEVVHKKRIRKG 95
           +  +E   L EGF +IE + +KR+RKG
Sbjct: 81  LFDEERTKLDEGFFEIEAIRRKRVRKG 107


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