BLASTX nr result
ID: Atractylodes22_contig00035988
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00035988
(442 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arab... 102 4e-44
ref|XP_002871302.1| hypothetical protein ARALYDRAFT_325405 [Arab... 104 1e-43
ref|NP_200908.1| Replication factor-A protein 1-like protein [Ar... 101 2e-43
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-... 101 2e-43
ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-... 101 2e-43
>ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp.
lyrata] gi|297312244|gb|EFH42668.1| hypothetical protein
ARALYDRAFT_496254 [Arabidopsis lyrata subsp. lyrata]
Length = 631
Score = 102 bits (254), Expect(2) = 4e-44
Identities = 44/74 (59%), Positives = 55/74 (74%)
Frame = +3
Query: 219 PVFFTTRTCMTSINPHRTISYRACKTCMKKVTAAFDSGYWCQRCQKNEEECNLRYILSAN 398
PVFF+TR ++ I P +T+ Y+ACKTC KKVT A DSGYWC+ CQK EEC+LRYI++
Sbjct: 471 PVFFSTRAYISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQKKYEECSLRYIMAVK 530
Query: 399 FSDVSGSTWFSMFN 440
+D SG TW S FN
Sbjct: 531 VTDSSGETWISSFN 544
Score = 100 bits (250), Expect(2) = 4e-44
Identities = 48/77 (62%), Positives = 61/77 (79%)
Frame = +1
Query: 1 KSVVVTLWNDQATYQGQEVFDMADKSPIIAIKSLRVSDFQGVSLSPLPNSYIRLNPDIPQ 180
K+VVV+LWND AT GQE+ DMADKSP++AIKSL+V DFQGVSLS + S + +NP+ P+
Sbjct: 356 KTVVVSLWNDLATGIGQELLDMADKSPVVAIKSLKVGDFQGVSLSTISRSNVVINPESPE 415
Query: 181 AHKLKSWYDSYGSLCSL 231
A KLKSW+DS G S+
Sbjct: 416 AKKLKSWFDSEGKEISM 432
>ref|XP_002871302.1| hypothetical protein ARALYDRAFT_325405 [Arabidopsis lyrata subsp.
lyrata] gi|297317139|gb|EFH47561.1| hypothetical protein
ARALYDRAFT_325405 [Arabidopsis lyrata subsp. lyrata]
Length = 604
Score = 104 bits (259), Expect(2) = 1e-43
Identities = 44/74 (59%), Positives = 56/74 (75%)
Frame = +3
Query: 219 PVFFTTRTCMTSINPHRTISYRACKTCMKKVTAAFDSGYWCQRCQKNEEECNLRYILSAN 398
PVFF+ R ++ I P +T+ YRACKTC KKVT A DSGYWC+ CQK ++EC+LRYI++
Sbjct: 445 PVFFSIRAYISFIKPDQTMWYRACKTCNKKVTEAMDSGYWCEGCQKKDQECSLRYIMAVK 504
Query: 399 FSDVSGSTWFSMFN 440
SD +G TWFS FN
Sbjct: 505 VSDSTGETWFSAFN 518
Score = 97.4 bits (241), Expect(2) = 1e-43
Identities = 47/76 (61%), Positives = 58/76 (76%)
Frame = +1
Query: 4 SVVVTLWNDQATYQGQEVFDMADKSPIIAIKSLRVSDFQGVSLSPLPNSYIRLNPDIPQA 183
+VVV+LWND AT GQE+ DMAD P+IAIKSL+V DFQGVSLS + S + +NPD P+A
Sbjct: 331 TVVVSLWNDLATGIGQELLDMADNHPVIAIKSLKVGDFQGVSLSTISRSNVVINPDSPEA 390
Query: 184 HKLKSWYDSYGSLCSL 231
KLKSWYD+ G S+
Sbjct: 391 KKLKSWYDAEGKETSM 406
>ref|NP_200908.1| Replication factor-A protein 1-like protein [Arabidopsis thaliana]
gi|10177323|dbj|BAB10649.1| replication protein A1
[Arabidopsis thaliana] gi|28393124|gb|AAO41995.1|
putative RNA helicase [Arabidopsis thaliana]
gi|332010026|gb|AED97409.1| Replication factor-A protein
1-like protein [Arabidopsis thaliana]
Length = 629
Score = 101 bits (251), Expect(2) = 2e-43
Identities = 43/74 (58%), Positives = 55/74 (74%)
Frame = +3
Query: 219 PVFFTTRTCMTSINPHRTISYRACKTCMKKVTAAFDSGYWCQRCQKNEEECNLRYILSAN 398
PVFF+TR ++ I P +T+ Y+ACKTC KKVT A DSGYWC+ CQ+ EEC+LRYI++
Sbjct: 469 PVFFSTRAYISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQRKYEECSLRYIMAVK 528
Query: 399 FSDVSGSTWFSMFN 440
+D SG TW S FN
Sbjct: 529 VTDSSGETWISSFN 542
Score = 99.8 bits (247), Expect(2) = 2e-43
Identities = 48/77 (62%), Positives = 61/77 (79%)
Frame = +1
Query: 1 KSVVVTLWNDQATYQGQEVFDMADKSPIIAIKSLRVSDFQGVSLSPLPNSYIRLNPDIPQ 180
K+VVV+LWND AT GQE+ DMAD+SP+IAIKSL+V DFQGVSLS + S + +NP+ P+
Sbjct: 354 KTVVVSLWNDLATGIGQELLDMADQSPVIAIKSLKVGDFQGVSLSTISRSNVVINPESPE 413
Query: 181 AHKLKSWYDSYGSLCSL 231
A KLKSW+DS G S+
Sbjct: 414 AKKLKSWFDSEGKEISM 430
>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 603
Score = 101 bits (251), Expect(2) = 2e-43
Identities = 48/77 (62%), Positives = 60/77 (77%)
Frame = +1
Query: 1 KSVVVTLWNDQATYQGQEVFDMADKSPIIAIKSLRVSDFQGVSLSPLPNSYIRLNPDIPQ 180
K+VV++LWND AT GQE+ D+AD+SPIIA+K LRV DFQGVSLS + S I +NPDI +
Sbjct: 330 KTVVISLWNDLATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKE 389
Query: 181 AHKLKSWYDSYGSLCSL 231
AH L+SWYDS G S+
Sbjct: 390 AHDLRSWYDSEGKAVSM 406
Score = 99.8 bits (247), Expect(2) = 2e-43
Identities = 43/74 (58%), Positives = 51/74 (68%)
Frame = +3
Query: 219 PVFFTTRTCMTSINPHRTISYRACKTCMKKVTAAFDSGYWCQRCQKNEEECNLRYILSAN 398
P FF+ R ++ I P +T+ YRACKTC KKVT A SGYWC CQKN+EEC+LRYI+
Sbjct: 445 PTFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVR 504
Query: 399 FSDVSGSTWFSMFN 440
SD SG W S FN
Sbjct: 505 VSDASGEAWVSTFN 518
>ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cucumis sativus]
Length = 560
Score = 101 bits (251), Expect(2) = 2e-43
Identities = 48/77 (62%), Positives = 60/77 (77%)
Frame = +1
Query: 1 KSVVVTLWNDQATYQGQEVFDMADKSPIIAIKSLRVSDFQGVSLSPLPNSYIRLNPDIPQ 180
K+VV++LWND AT GQE+ D+AD+SPIIA+K LRV DFQGVSLS + S I +NPDI +
Sbjct: 287 KTVVISLWNDLATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKE 346
Query: 181 AHKLKSWYDSYGSLCSL 231
AH L+SWYDS G S+
Sbjct: 347 AHDLRSWYDSEGKAVSM 363
Score = 99.8 bits (247), Expect(2) = 2e-43
Identities = 43/74 (58%), Positives = 51/74 (68%)
Frame = +3
Query: 219 PVFFTTRTCMTSINPHRTISYRACKTCMKKVTAAFDSGYWCQRCQKNEEECNLRYILSAN 398
P FF+ R ++ I P +T+ YRACKTC KKVT A SGYWC CQKN+EEC+LRYI+
Sbjct: 402 PTFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVR 461
Query: 399 FSDVSGSTWFSMFN 440
SD SG W S FN
Sbjct: 462 VSDASGEAWVSTFN 475