BLASTX nr result

ID: Atractylodes22_contig00035951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035951
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67841.1| hypothetical protein VITISV_016664 [Vitis vinifera]    49   6e-08
emb|CBI32283.3| unnamed protein product [Vitis vinifera]               49   6e-08
ref|XP_002270509.2| PREDICTED: cohesin subunit SA-1-like [Vitis ...    49   6e-08
ref|XP_002520706.1| stromal antigen, putative [Ricinus communis]...    47   5e-07

>emb|CAN67841.1| hypothetical protein VITISV_016664 [Vitis vinifera]
          Length = 1616

 Score = 48.9 bits (115), Expect(2) = 6e-08
 Identities = 23/39 (58%), Positives = 28/39 (71%)
 Frame = +2

Query: 158 IEAFRGDRNSISQVVKCWVNQYKKDLEPVMVELLSMLFK 274
           IE  +G+   I QVVK WV QY+KD +P MVELL MLF+
Sbjct: 468 IEVIKGNGKLIPQVVKLWVEQYEKDPKPAMVELLMMLFE 506



 Score = 33.1 bits (74), Expect(2) = 6e-08
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +3

Query: 375 IVHVCGAKYRIKRESLDD-DVKEVVHTLVDLAK 470
           +   CGAKY ++ E LD+ DV +VV  LV+LA+
Sbjct: 504 LFEACGAKYHLREELLDETDVDDVVVALVNLAR 536


>emb|CBI32283.3| unnamed protein product [Vitis vinifera]
          Length = 1144

 Score = 48.9 bits (115), Expect(2) = 6e-08
 Identities = 23/39 (58%), Positives = 28/39 (71%)
 Frame = +2

Query: 158 IEAFRGDRNSISQVVKCWVNQYKKDLEPVMVELLSMLFK 274
           IE  +G+   I QVVK WV QY+KD +P MVELL MLF+
Sbjct: 82  IEVIKGNGKLIPQVVKLWVEQYEKDPKPAMVELLMMLFE 120



 Score = 33.1 bits (74), Expect(2) = 6e-08
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +3

Query: 375 IVHVCGAKYRIKRESLDD-DVKEVVHTLVDLAK 470
           +   CGAKY ++ E LD+ DV +VV  LV+LA+
Sbjct: 118 LFEACGAKYHLREELLDETDVDDVVVALVNLAR 150


>ref|XP_002270509.2| PREDICTED: cohesin subunit SA-1-like [Vitis vinifera]
          Length = 1143

 Score = 48.9 bits (115), Expect(2) = 6e-08
 Identities = 23/39 (58%), Positives = 28/39 (71%)
 Frame = +2

Query: 158 IEAFRGDRNSISQVVKCWVNQYKKDLEPVMVELLSMLFK 274
           IE  +G+   I QVVK WV QY+KD +P MVELL MLF+
Sbjct: 82  IEVIKGNGKLIPQVVKLWVEQYEKDPKPAMVELLMMLFE 120



 Score = 33.1 bits (74), Expect(2) = 6e-08
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +3

Query: 375 IVHVCGAKYRIKRESLDD-DVKEVVHTLVDLAK 470
           +   CGAKY ++ E LD+ DV +VV  LV+LA+
Sbjct: 118 LFEACGAKYHLREELLDETDVDDVVVALVNLAR 150


>ref|XP_002520706.1| stromal antigen, putative [Ricinus communis]
           gi|223540091|gb|EEF41668.1| stromal antigen, putative
           [Ricinus communis]
          Length = 1106

 Score = 46.6 bits (109), Expect(2) = 5e-07
 Identities = 20/39 (51%), Positives = 29/39 (74%)
 Frame = +2

Query: 158 IEAFRGDRNSISQVVKCWVNQYKKDLEPVMVELLSMLFK 274
           IE  +G+  +I Q VK WV +Y+K+ +P MVELL+MLF+
Sbjct: 71  IEVIKGNGKNIPQAVKLWVEEYEKNQKPAMVELLTMLFE 109



 Score = 32.3 bits (72), Expect(2) = 5e-07
 Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +3

Query: 375 IVHVCGAKYRIKRESLDD-DVKEVVHTLVDLAK 470
           +   CGAK+ IK E LD+ DV +VV  LV+LA+
Sbjct: 107 LFEACGAKFCIKEELLDETDVDDVVVALVNLAR 139


Top