BLASTX nr result
ID: Atractylodes22_contig00035859
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00035859
(612 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278390.1| PREDICTED: pentatricopeptide repeat-containi... 112 5e-36
ref|XP_002521239.1| pentatricopeptide repeat-containing protein,... 81 2e-27
ref|XP_003592666.1| Pentatricopeptide repeat-containing protein ... 88 3e-26
ref|XP_004141623.1| PREDICTED: uncharacterized protein LOC101204... 87 5e-24
ref|XP_004156246.1| PREDICTED: uncharacterized protein LOC101223... 87 5e-24
>ref|XP_002278390.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
[Vitis vinifera] gi|297744557|emb|CBI37819.3| unnamed
protein product [Vitis vinifera]
Length = 435
Score = 112 bits (280), Expect(2) = 5e-36
Identities = 53/83 (63%), Positives = 63/83 (75%)
Frame = -3
Query: 253 PLYSTISRTSWFNWNAKLVADVIASLCKHQRFDEAQTLVSEVEAKLGSRERDLCNFYCNL 74
PLYS IS SWF+WN KL+ADVIA L K + EA+TLVSE KLGSRERDL +FYCNL
Sbjct: 82 PLYSRISEASWFSWNPKLIADVIALLYKQGQLKEAETLVSETLIKLGSRERDLVSFYCNL 141
Query: 73 IDSHSKHRSKQAIYDSYERINRL 5
IDSHSKH S Q ++D R++R+
Sbjct: 142 IDSHSKHSSNQGVFDVISRLSRI 164
Score = 64.7 bits (156), Expect(2) = 5e-36
Identities = 38/73 (52%), Positives = 51/73 (69%)
Frame = -2
Query: 557 LQLSLPPSFHHRHKTSLRMTPPIRAALSKQGHRFLTSVATTDDPATTARLIRKFVASSSR 378
LQ+S P ++HR I+ ALSKQG FL+SVA DP+ + RLI KF+ASSS+
Sbjct: 5 LQVSRPQPWNHRSPLL------IQCALSKQGQLFLSSVAR--DPSASNRLICKFIASSSK 56
Query: 377 SVALDAISHLISP 339
S+AL+A+SHL+SP
Sbjct: 57 SIALNALSHLLSP 69
>ref|XP_002521239.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539507|gb|EEF41095.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 460
Score = 80.9 bits (198), Expect(2) = 2e-27
Identities = 40/82 (48%), Positives = 53/82 (64%)
Frame = -3
Query: 250 LYSTISRTSWFNWNAKLVADVIASLCKHQRFDEAQTLVSEVEAKLGSRERDLCNFYCNLI 71
LY I+ WF WN KLVADV+A L K R+DE+ TLVS+ +KL +ERDL FYCNL+
Sbjct: 108 LYLKIAEARWFQWNPKLVADVVAFLDKQGRYDESATLVSDSISKLQVKERDLARFYCNLV 167
Query: 70 DSHSKHRSKQAIYDSYERINRL 5
+S SK S + +S + +L
Sbjct: 168 ESQSKQNSIRGFDNSVASLMQL 189
Score = 67.4 bits (163), Expect(2) = 2e-27
Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 7/73 (9%)
Frame = -2
Query: 530 HHRHKTSLRMTPPIR----AALSKQGHRFLTSVA---TTDDPATTARLIRKFVASSSRSV 372
HHRH+ ++ P AALSKQG RFL+S+A T D T RLI+KFVA+S +S+
Sbjct: 24 HHRHRNQQQVLPMKWVFRCAALSKQGQRFLSSLAIATTKGDTVATNRLIKKFVAASPKSI 83
Query: 371 ALDAISHLISPNN 333
ALDA+SHL++P++
Sbjct: 84 ALDALSHLLNPHS 96
>ref|XP_003592666.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481714|gb|AES62917.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 454
Score = 88.2 bits (217), Expect(2) = 3e-26
Identities = 39/83 (46%), Positives = 55/83 (66%)
Frame = -3
Query: 253 PLYSTISRTSWFNWNAKLVADVIASLCKHQRFDEAQTLVSEVEAKLGSRERDLCNFYCNL 74
PLY+ IS + W+ WN + AD+I L KHQR+ E+QTL+SE +KL ++ERD+ FY L
Sbjct: 101 PLYTRISESQWYTWNPTIFADLITLLHKHQRYTESQTLISEATSKLNNKERDIVLFYAKL 160
Query: 73 IDSHSKHRSKQAIYDSYERINRL 5
+DSHSK S+ +Y +N L
Sbjct: 161 LDSHSKRASQTGFDFAYSHLNNL 183
Score = 56.2 bits (134), Expect(2) = 3e-26
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Frame = -2
Query: 554 QLSLPPSFHHRHKTSLRMTP--PIRAALSKQGHRFLTSVATTDDPATTARLIRKFVASSS 381
Q LPP + +T LR+ IR L+KQG RFLT ++TT+ T LIRKFV SS
Sbjct: 20 QCPLPPP---QLQTQLRLKKNNTIRCTLTKQGQRFLTKLSTTN--TNTENLIRKFVQSSP 74
Query: 380 RSVALDAISHLISP 339
+SV L ++HL+SP
Sbjct: 75 KSVLLSTLTHLLSP 88
>ref|XP_004141623.1| PREDICTED: uncharacterized protein LOC101204365 [Cucumis sativus]
Length = 1913
Score = 86.7 bits (213), Expect(2) = 5e-24
Identities = 40/82 (48%), Positives = 57/82 (69%)
Frame = -3
Query: 250 LYSTISRTSWFNWNAKLVADVIASLCKHQRFDEAQTLVSEVEAKLGSRERDLCNFYCNLI 71
LYS I+ SWF WN+KLVAD++A L ++ + E++ L+SE +KLGS+ER L NFY L+
Sbjct: 108 LYSRITEASWFTWNSKLVADLVAFLDQNGLYSESEVLISEAISKLGSQERKLVNFYSQLV 167
Query: 70 DSHSKHRSKQAIYDSYERINRL 5
+S SKH ++ DSY R+ L
Sbjct: 168 ESQSKHGFERGFVDSYSRLLEL 189
Score = 50.1 bits (118), Expect(2) = 5e-24
Identities = 25/50 (50%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
Frame = -2
Query: 482 ALSKQGHRFLTSVATT---DDPATTARLIRKFVASSSRSVALDAISHLIS 342
+L+KQ HRFL++++TT D + T RLIRKFVASS +S+ L +S+++S
Sbjct: 44 SLTKQTHRFLSTLSTTAATGDQSATNRLIRKFVASSPKSITLSVLSNIVS 93
>ref|XP_004156246.1| PREDICTED: uncharacterized protein LOC101223617 [Cucumis sativus]
Length = 1296
Score = 86.7 bits (213), Expect(2) = 5e-24
Identities = 40/82 (48%), Positives = 57/82 (69%)
Frame = -3
Query: 250 LYSTISRTSWFNWNAKLVADVIASLCKHQRFDEAQTLVSEVEAKLGSRERDLCNFYCNLI 71
LYS I+ SWF WN+KLVAD++A L ++ + E++ L+SE +KLGS+ER L NFY L+
Sbjct: 108 LYSRITEASWFTWNSKLVADLVAFLDQNGLYSESEVLISEAISKLGSQERKLVNFYSQLV 167
Query: 70 DSHSKHRSKQAIYDSYERINRL 5
+S SKH ++ DSY R+ L
Sbjct: 168 ESQSKHGFERGFVDSYSRLLEL 189
Score = 50.1 bits (118), Expect(2) = 5e-24
Identities = 25/50 (50%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
Frame = -2
Query: 482 ALSKQGHRFLTSVATT---DDPATTARLIRKFVASSSRSVALDAISHLIS 342
+L+KQ HRFL++++TT D + T RLIRKFVASS +S+ L +S+++S
Sbjct: 44 SLTKQTHRFLSTLSTTAATGDQSATNRLIRKFVASSPKSITLSVLSNIVS 93