BLASTX nr result

ID: Atractylodes22_contig00035858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035858
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277959.1| PREDICTED: GATA transcription factor 2 [Viti...   107   1e-21
emb|CBI16598.3| unnamed protein product [Vitis vinifera]              100   2e-19
dbj|BAC98493.1| AG-motif binding protein-3 [Nicotiana tabacum]         94   1e-17
ref|XP_002511642.1| GATA transcription factor, putative [Ricinus...    85   7e-15
ref|XP_002876563.1| zinc finger family protein [Arabidopsis lyra...    83   3e-14

>ref|XP_002277959.1| PREDICTED: GATA transcription factor 2 [Vitis vinifera]
          Length = 270

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/84 (61%), Positives = 61/84 (72%)
 Frame = +2

Query: 107 HSTDFTDHFCVPNDDVAELEWLSQFVDDSSSDFPANNIAGTINFRPENTSFHSRSRSKRT 286
           HS DFTD  CVP+DDVAELEWLS FVDDS +DFP N +AGT+  RP+ +SF  R+RSKR+
Sbjct: 61  HSADFTDDLCVPSDDVAELEWLSNFVDDSFADFPENELAGTVMARPD-SSFPGRTRSKRS 119

Query: 287 RAPSNNNSWTSTPVPNAPISETSK 358
           RA S N  WTS PV   P+   SK
Sbjct: 120 RASSTNKVWTSLPVSEIPMIGKSK 143


>emb|CBI16598.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/72 (65%), Positives = 56/72 (77%)
 Frame = +2

Query: 107 HSTDFTDHFCVPNDDVAELEWLSQFVDDSSSDFPANNIAGTINFRPENTSFHSRSRSKRT 286
           HS DFTD  CVP+DDVAELEWLS FVDDS +DFP N +AGT+  RP+ +SF  R+RSKR+
Sbjct: 61  HSADFTDDLCVPSDDVAELEWLSNFVDDSFADFPENELAGTVMARPD-SSFPGRTRSKRS 119

Query: 287 RAPSNNNSWTST 322
           RA S N  WTS+
Sbjct: 120 RASSTNKVWTSS 131


>dbj|BAC98493.1| AG-motif binding protein-3 [Nicotiana tabacum]
          Length = 256

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 47/72 (65%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
 Frame = +2

Query: 110 STDFTDHFCVPNDDVAELEWLSQFVDDSSSDFPANNIAGTINFRPENT-SFHSRSRSKRT 286
           S DFTD+ CVP+DDVAELEWLS FV+DS S+FP N+I GT+N    +T SFHSRSRSKR+
Sbjct: 69  SDDFTDNLCVPSDDVAELEWLSNFVEDSFSNFPTNSITGTMNLSSNSTASFHSRSRSKRS 128

Query: 287 RAPSNNNSWTST 322
           R+ S   SWTS+
Sbjct: 129 RSTS---SWTSS 137


>ref|XP_002511642.1| GATA transcription factor, putative [Ricinus communis]
           gi|223548822|gb|EEF50311.1| GATA transcription factor,
           putative [Ricinus communis]
          Length = 235

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/74 (55%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
 Frame = +2

Query: 110 STDFTDHFCVPNDDVAELEWLSQFVDDSSSDFPANNIAGTINFRPENTSFHSRSRSKRTR 289
           STDFTDH  VP+DDVAELEWLSQFVDDS  +FP N + GTIN R + +     +R KR++
Sbjct: 60  STDFTDHLSVPSDDVAELEWLSQFVDDSFIEFPPNLLTGTINVRSDTSFSGKAARRKRSK 119

Query: 290 APSN--NNSWTSTP 325
           A +     +WTS+P
Sbjct: 120 AATTTATTAWTSSP 133


>ref|XP_002876563.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322401|gb|EFH52822.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 240

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 4/116 (3%)
 Frame = +2

Query: 8   DIFNNITPSTASGSQLQSXXXXXXXXXXXXXXHHS----TDFTDHFCVPNDDVAELEWLS 175
           +IF++ T ST + S   S              + S    TDFT   CVP+DD A LEWLS
Sbjct: 19  EIFSSSTSSTVTSSAASSAGSSENPFNFPSSAYTSPPLLTDFTHDLCVPSDDAAHLEWLS 78

Query: 176 QFVDDSSSDFPANNIAGTINFRPENTSFHSRSRSKRTRAPSNNNSWTSTPVPNAPI 343
           +FVDDS SDFPAN +  T+  RPE  SF  + RS+R+RAP+ + + T  P+P + +
Sbjct: 79  RFVDDSFSDFPANPL--TMTVRPE-ISFTGKPRSRRSRAPAPSVAGTWAPMPESEL 131


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