BLASTX nr result

ID: Atractylodes22_contig00035798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035798
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306911.1| predicted protein [Populus trichocarpa] gi|2...    66   6e-09
ref|XP_002510504.1| nucleic acid binding protein, putative [Rici...    63   5e-08
gb|AAO14624.2|AF467900_1 hypothetical protein [Prunus persica]         61   2e-07
ref|XP_002301991.1| predicted protein [Populus trichocarpa] gi|2...    59   6e-07
ref|XP_003519872.1| PREDICTED: zinc finger CCCH domain-containin...    59   1e-06

>ref|XP_002306911.1| predicted protein [Populus trichocarpa] gi|222856360|gb|EEE93907.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 19/94 (20%)
 Frame = -1

Query: 392 KDSEYYRRLISQHG-------------------TTQEGSVKRAGESGPQEARLCVYFNSP 270
           KD  YY+ LI QHG                   T+Q+    ++ ES  +  + C+YFN+P
Sbjct: 301 KDMSYYKNLIQQHGGDRQETPQQFGGRYNHQIGTSQDLVNSKSRESKHKIMKPCIYFNTP 360

Query: 269 RGCRHGSSCRFQHVKVNMKGGSRAVDELSAKRMK 168
           RGCR+G++C +QH   + K GS   +  SAKRMK
Sbjct: 361 RGCRNGANCAYQHDSSSQKKGSSIAEVQSAKRMK 394


>ref|XP_002510504.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223551205|gb|EEF52691.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 461

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 19/95 (20%)
 Frame = -1

Query: 395 IKDSEYYRRLISQHG-------------------TTQEGSVKRAGESGPQEARLCVYFNS 273
           +KD  YY+ LI QHG                   T QE    ++ E  P+  + C+YFNS
Sbjct: 360 VKDMNYYKNLIQQHGGERQEAPHQYGNRYSQLAGTNQELVNPKSRELKPKIMKPCIYFNS 419

Query: 272 PRGCRHGSSCRFQHVKVNMKGGSRAVDELSAKRMK 168
            RGCRHG++C +QH     +  S   +  SAKRMK
Sbjct: 420 SRGCRHGANCAYQHDPSFQQRSSAISEVQSAKRMK 454


>gb|AAO14624.2|AF467900_1 hypothetical protein [Prunus persica]
          Length = 441

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/96 (36%), Positives = 46/96 (47%), Gaps = 21/96 (21%)
 Frame = -1

Query: 392 KDSEYYRRLISQHGTTQEGSVKRAG--------------------ESGPQEARLCVYFNS 273
           KD  YY+ LI QHG  +  S    G                    +S P+  + C+YFNS
Sbjct: 339 KDINYYKSLIQQHGGDRHDSFPPFGNRHSDHSAINQESNNGYKSRDSKPKIMKPCIYFNS 398

Query: 272 PRGCRHGSSCRFQH-VKVNMKGGSRAVDELSAKRMK 168
            RGCRHG++C +QH      +G S A +  S KRMK
Sbjct: 399 SRGCRHGANCAYQHDASFQPRGSSSAPEVHSTKRMK 434


>ref|XP_002301991.1| predicted protein [Populus trichocarpa] gi|222843717|gb|EEE81264.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 19/94 (20%)
 Frame = -1

Query: 392 KDSEYYRRLISQHG-------------------TTQEGSVKRAGESGPQEARLCVYFNSP 270
           KD  YY+ LI QHG                   T+Q+    ++ ES  +  + C+YFNS 
Sbjct: 325 KDINYYKNLIQQHGGDKQETPQQFGSRYNHQVGTSQDLVNSKSRESKHKIMKPCIYFNSS 384

Query: 269 RGCRHGSSCRFQHVKVNMKGGSRAVDELSAKRMK 168
           RGCR+G +C +QH   + + GS   +  S+KRMK
Sbjct: 385 RGCRNGVNCAYQHDSSSQQKGSGITEVQSSKRMK 418


>ref|XP_003519872.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
           [Glycine max]
          Length = 520

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 20/100 (20%)
 Frame = -1

Query: 392 KDSEYYRRLISQHGTTQEG--------------------SVKRAGESGPQEARLCVYFNS 273
           K + YY+ LI QHG  ++                     ++K+  E  P+  + C+YF S
Sbjct: 422 KRANYYKNLIRQHGADKQDIQDSHIGIRHSNFQDMKPVHNIKQR-EVKPKILKPCIYFKS 480

Query: 272 PRGCRHGSSCRFQHVKVNMKGGSRAVDELSAKRMKPSGGN 153
           PRGCR+GS+C +QH     +G    +   SAKR+K  G N
Sbjct: 481 PRGCRNGSNCSYQHDVSAQEGAGNVLRAQSAKRLKLGGEN 520


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