BLASTX nr result

ID: Atractylodes22_contig00035790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035790
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304163.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
dbj|BAJ53248.1| JHL25H03.11 [Jatropha curcas]                         112   4e-23
ref|XP_004158807.1| PREDICTED: (6-4)DNA photolyase-like [Cucumis...   108   4e-22
ref|XP_004136080.1| PREDICTED: (6-4)DNA photolyase-like [Cucumis...   108   4e-22
ref|XP_002285327.2| PREDICTED: (6-4)DNA photolyase [Vitis vinifera]   108   4e-22

>ref|XP_002304163.1| predicted protein [Populus trichocarpa] gi|222841595|gb|EEE79142.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  113 bits (283), Expect = 1e-23
 Identities = 50/63 (79%), Positives = 57/63 (90%)
 Frame = -2

Query: 252 SGLNSLMWFRKGLRIHDNPALEYAANNSSYVYPIFVIDPHYMKPDPKAFSTGSKLAGLNR 73
           SG  S++WFRKGLRIHDNPALEYA+  S +VYP+FVIDPHYM+PDPKAFS GS+LAGLNR
Sbjct: 4   SGSGSIIWFRKGLRIHDNPALEYASKGSDFVYPVFVIDPHYMEPDPKAFSPGSRLAGLNR 63

Query: 72  IRF 64
           IRF
Sbjct: 64  IRF 66


>dbj|BAJ53248.1| JHL25H03.11 [Jatropha curcas]
          Length = 536

 Score =  112 bits (279), Expect = 4e-23
 Identities = 50/65 (76%), Positives = 57/65 (87%)
 Frame = -2

Query: 258 MTSGLNSLMWFRKGLRIHDNPALEYAANNSSYVYPIFVIDPHYMKPDPKAFSTGSKLAGL 79
           M SG ++LMWFRKGLRIHDNPALEYA+  S++VYP+FVIDPHYMKPDP AFS GS  AGL
Sbjct: 1   MPSGSSTLMWFRKGLRIHDNPALEYASKGSNFVYPVFVIDPHYMKPDPNAFSPGSTRAGL 60

Query: 78  NRIRF 64
           NRI+F
Sbjct: 61  NRIKF 65


>ref|XP_004158807.1| PREDICTED: (6-4)DNA photolyase-like [Cucumis sativus]
          Length = 544

 Score =  108 bits (271), Expect = 4e-22
 Identities = 48/65 (73%), Positives = 54/65 (83%)
 Frame = -2

Query: 258 MTSGLNSLMWFRKGLRIHDNPALEYAANNSSYVYPIFVIDPHYMKPDPKAFSTGSKLAGL 79
           M    NSLMWFRKG+RIHDNPALEYAA  + ++YP+FVIDPHYM+PDP AFS GS  AGL
Sbjct: 1   MAPSSNSLMWFRKGIRIHDNPALEYAAKGAKFLYPVFVIDPHYMEPDPSAFSLGSSRAGL 60

Query: 78  NRIRF 64
           NRIRF
Sbjct: 61  NRIRF 65


>ref|XP_004136080.1| PREDICTED: (6-4)DNA photolyase-like [Cucumis sativus]
          Length = 549

 Score =  108 bits (271), Expect = 4e-22
 Identities = 48/65 (73%), Positives = 54/65 (83%)
 Frame = -2

Query: 258 MTSGLNSLMWFRKGLRIHDNPALEYAANNSSYVYPIFVIDPHYMKPDPKAFSTGSKLAGL 79
           M    NSLMWFRKG+RIHDNPALEYAA  + ++YP+FVIDPHYM+PDP AFS GS  AGL
Sbjct: 1   MAPSSNSLMWFRKGIRIHDNPALEYAAKGAKFLYPVFVIDPHYMEPDPSAFSLGSSRAGL 60

Query: 78  NRIRF 64
           NRIRF
Sbjct: 61  NRIRF 65


>ref|XP_002285327.2| PREDICTED: (6-4)DNA photolyase [Vitis vinifera]
          Length = 564

 Score =  108 bits (271), Expect = 4e-22
 Identities = 49/67 (73%), Positives = 58/67 (86%)
 Frame = -2

Query: 264 PNMTSGLNSLMWFRKGLRIHDNPALEYAANNSSYVYPIFVIDPHYMKPDPKAFSTGSKLA 85
           P+M SG +SLMWFRKGLRIHDNPAL++AA  S+ VYP+FVIDP++M+PDP AFS GS  A
Sbjct: 25  PSMASGSSSLMWFRKGLRIHDNPALQHAAKESNCVYPVFVIDPYFMEPDPNAFSPGSSRA 84

Query: 84  GLNRIRF 64
           GLNRIRF
Sbjct: 85  GLNRIRF 91


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