BLASTX nr result

ID: Atractylodes22_contig00035774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035774
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...   201   5e-50
ref|XP_003638252.1| ATP-dependent RNA helicase A-like protein, p...   198   4e-49
ref|XP_002316463.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinu...   195   4e-48
emb|CBI18267.3| unnamed protein product [Vitis vinifera]              191   4e-47

>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1161

 Score =  201 bits (511), Expect = 5e-50
 Identities = 97/120 (80%), Positives = 105/120 (87%)
 Frame = +1

Query: 1    ESKKPKESSDNDRFTRDGANPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQF 180
            ES+KPK S+D ++FT+DG NPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQF
Sbjct: 1042 ESRKPKASNDENKFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQF 1101

Query: 181  VGKPKRNKQLAERDAAVEALAWLTHTSGTKKDEDDPSPPDLTDNMLKLLSKPRKPNSRSG 360
            VGKPKRNKQLAERDAA+EALAWLTHTS   + EDD SPPD+TDNMLKLL K RK     G
Sbjct: 1102 VGKPKRNKQLAERDAAIEALAWLTHTSDNNQHEDDKSPPDVTDNMLKLLGKRRKSKRGHG 1161


>ref|XP_003638252.1| ATP-dependent RNA helicase A-like protein, partial [Medicago
           truncatula] gi|355504187|gb|AES85390.1| ATP-dependent
           RNA helicase A-like protein, partial [Medicago
           truncatula]
          Length = 333

 Score =  198 bits (503), Expect = 4e-49
 Identities = 95/118 (80%), Positives = 105/118 (88%)
 Frame = +1

Query: 1   ESKKPKESSDNDRFTRDGANPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQF 180
           +S+KPK S+D ++FT+DG NPKSLLQTLLMRAGHS PKYKTKHLKTNEFRALVEFKGMQF
Sbjct: 213 DSRKPKASNDENKFTKDGTNPKSLLQTLLMRAGHSAPKYKTKHLKTNEFRALVEFKGMQF 272

Query: 181 VGKPKRNKQLAERDAAVEALAWLTHTSGTKKDEDDPSPPDLTDNMLKLLSKPRKPNSR 354
           VGKPKRNKQLAERDAA+EALAWLTHTS   + EDD SPPD+TDNMLKLL K RK + R
Sbjct: 273 VGKPKRNKQLAERDAAIEALAWLTHTSDNAQPEDDKSPPDVTDNMLKLLGKRRKSSKR 330


>ref|XP_002316463.1| predicted protein [Populus trichocarpa] gi|222865503|gb|EEF02634.1|
            predicted protein [Populus trichocarpa]
          Length = 1077

 Score =  196 bits (498), Expect = 2e-48
 Identities = 95/120 (79%), Positives = 104/120 (86%)
 Frame = +1

Query: 1    ESKKPKESSDNDRFTRDGANPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQF 180
            ES+KPK  +DNDRFT DGANPKSLLQTLLMR+GHSPPKYKTKHLKTNEFRALVEFKGMQF
Sbjct: 958  ESRKPKIINDNDRFTEDGANPKSLLQTLLMRSGHSPPKYKTKHLKTNEFRALVEFKGMQF 1017

Query: 181  VGKPKRNKQLAERDAAVEALAWLTHTSGTKKDEDDPSPPDLTDNMLKLLSKPRKPNSRSG 360
            VGKPKRNKQLAE DAA+EALAWLTHTS   ++E D S PD+TDNMLK+L K R+    SG
Sbjct: 1018 VGKPKRNKQLAEGDAAIEALAWLTHTSNNNQNEHDDSQPDVTDNMLKVLGKRRRSKRHSG 1077


>ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223546447|gb|EEF47947.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1129

 Score =  195 bits (495), Expect = 4e-48
 Identities = 95/120 (79%), Positives = 108/120 (90%)
 Frame = +1

Query: 1    ESKKPKESSDNDRFTRDGANPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQF 180
            ESKKPKESS++ RFT+DG NPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQF
Sbjct: 1011 ESKKPKESSES-RFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQF 1069

Query: 181  VGKPKRNKQLAERDAAVEALAWLTHTSGTKKDEDDPSPPDLTDNMLKLLSKPRKPNSRSG 360
            VGKPK+NKQLAERDAA+EALAWLTHTS + ++E++ S PD+TDNMLKLL K R+    +G
Sbjct: 1070 VGKPKKNKQLAERDAAIEALAWLTHTSDSSQEENEKSQPDVTDNMLKLLGKRRRSKRHAG 1129


>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score =  191 bits (486), Expect = 4e-47
 Identities = 97/129 (75%), Positives = 110/129 (85%), Gaps = 2/129 (1%)
 Frame = +1

Query: 1    ESKKPKESSDNDRFTRDGANPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQF 180
            ESKKP+E  D++RFT+DG NPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQF
Sbjct: 1017 ESKKPREPCDSNRFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQF 1076

Query: 181  VGKPKRNKQLAERDAAVEALAWLTHTSGTKKDE--DDPSPPDLTDNMLKLLSKPRKPNSR 354
            VGKPK+NKQLAERDAA+EALAWLTHTS   + E  +D SPPD+T+NMLK+L K R    R
Sbjct: 1077 VGKPKKNKQLAERDAAIEALAWLTHTSDNSQGEYGEDESPPDVTNNMLKILGKRR----R 1132

Query: 355  SGRA*NTSS 381
            S R+ N S+
Sbjct: 1133 SKRSTNNST 1141


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