BLASTX nr result

ID: Atractylodes22_contig00035716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035716
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306508.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_002274044.2| PREDICTED: pentatricopeptide repeat-containi...    88   6e-16
emb|CBI29169.3| unnamed protein product [Vitis vinifera]               88   6e-16
emb|CAN64312.1| hypothetical protein VITISV_027954 [Vitis vinifera]    88   6e-16
ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containi...    88   8e-16

>ref|XP_002306508.1| predicted protein [Populus trichocarpa] gi|222855957|gb|EEE93504.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 4/91 (4%)
 Frame = +1

Query: 91  NPAKRLS-PISFSD---HQTPKRPNPDHNLSLREEPIVDQTTILQTLTCYGNDWKRAMEF 258
           NPAK L  P S +    H   + PNP  +  L     +D +T+ QTL+CY NDWKRA++F
Sbjct: 11  NPAKTLLLPYSTNTPTFHFHSRTPNPPQSDPLN----LDSSTVFQTLSCYNNDWKRALDF 66

Query: 259 FHWVESEYGFKHTTETCNHMIDILGKFFEYD 351
           F+WVE+E  F+HTTET N MIDILGKFFE+D
Sbjct: 67  FNWVETESQFQHTTETYNRMIDILGKFFEFD 97


>ref|XP_002274044.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial-like [Vitis vinifera]
          Length = 390

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/89 (50%), Positives = 57/89 (64%), Gaps = 7/89 (7%)
 Frame = +1

Query: 106 LSPISFSDHQTPKRPNPDHNLSLREEPIV-------DQTTILQTLTCYGNDWKRAMEFFH 264
           L P + S    P +P     LS    PI+       D +T+ QTL+CY NDWKRA+EFF 
Sbjct: 20  LYPFTQSFSTKPFKPIEPEPLS---NPIISPNSTSFDHSTVRQTLSCYANDWKRALEFFD 76

Query: 265 WVESEYGFKHTTETCNHMIDILGKFFEYD 351
           WV+++ GF HTT+T N MIDILGKFFE+D
Sbjct: 77  WVQTQCGFNHTTDTYNGMIDILGKFFEFD 105


>emb|CBI29169.3| unnamed protein product [Vitis vinifera]
          Length = 234

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/89 (50%), Positives = 57/89 (64%), Gaps = 7/89 (7%)
 Frame = +1

Query: 106 LSPISFSDHQTPKRPNPDHNLSLREEPIV-------DQTTILQTLTCYGNDWKRAMEFFH 264
           L P + S    P +P     LS    PI+       D +T+ QTL+CY NDWKRA+EFF 
Sbjct: 20  LYPFTQSFSTKPFKPIEPEPLS---NPIISPNSTSFDHSTVRQTLSCYANDWKRALEFFD 76

Query: 265 WVESEYGFKHTTETCNHMIDILGKFFEYD 351
           WV+++ GF HTT+T N MIDILGKFFE+D
Sbjct: 77  WVQTQCGFNHTTDTYNGMIDILGKFFEFD 105


>emb|CAN64312.1| hypothetical protein VITISV_027954 [Vitis vinifera]
          Length = 655

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/89 (50%), Positives = 57/89 (64%), Gaps = 7/89 (7%)
 Frame = +1

Query: 106 LSPISFSDHQTPKRPNPDHNLSLREEPIV-------DQTTILQTLTCYGNDWKRAMEFFH 264
           L P + S    P +P     LS    PI+       D +T+ QTL+CY NDWKRA+EFF 
Sbjct: 255 LYPFTQSFSTKPFKPIEPEPLS---NPIISPNSTSFDHSTVRQTLSCYANDWKRALEFFD 311

Query: 265 WVESEYGFKHTTETCNHMIDILGKFFEYD 351
           WV+++ GF HTT+T N MIDILGKFFE+D
Sbjct: 312 WVQTQCGFNHTTDTYNGMIDILGKFFEFD 340


>ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial-like [Vitis vinifera]
          Length = 571

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 36/53 (67%), Positives = 45/53 (84%)
 Frame = +1

Query: 193 DQTTILQTLTCYGNDWKRAMEFFHWVESEYGFKHTTETCNHMIDILGKFFEYD 351
           D +T+ QTL+CY NDWKRA+EFF WV+++ GF HTT+T N MIDILGKFFE+D
Sbjct: 177 DHSTVRQTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKFFEFD 229


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