BLASTX nr result

ID: Atractylodes22_contig00035639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035639
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621588.1| DNA-directed RNA polymerase [Medicago trunca...    83   3e-14
ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula] g...    81   1e-13
emb|CCA66198.1| hypothetical protein [Beta vulgaris subsp. vulga...    80   2e-13
gb|AAN04214.1| Putative retroelement [Oryza sativa Japonica Grou...    79   5e-13
gb|EAZ15378.1| hypothetical protein OsJ_30792 [Oryza sativa Japo...    79   5e-13

>ref|XP_003621588.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355496603|gb|AES77806.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 895

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
 Frame = -2

Query: 433 KVGNGSSTRFWIDCWTGSCPLKDQFPNLFRIESNKLCLVADRYDFENKVFDNKWKWKRAP 254
           +VG+G+ T FW D W     LK+ F  LF + +NK+  VA+ Y          WKW+R  
Sbjct: 111 EVGDGTQTLFWWDPWIDGMVLKNSFSRLFDLATNKMATVAEMYSLGWGEEGEAWKWRR-- 168

Query: 253 GSNDTSAEWERLQGTMEGIKLGRESDKWVWNVKENNDFSVAAIKRLLTSDT---VPRSRV 83
                   WE         +    SD+W+W++  +N ++V +    L S T   +    +
Sbjct: 169 ----RLLAWEE--------EKSNHSDRWIWHLHSSNKYNVTSAYNYLLSSTNNNLAADHI 216

Query: 82  VVEWVKWVPSKCNILWWRILLNRIPT 5
              W K VP K ++  WR+L NR+PT
Sbjct: 217 TEIWNKEVPLKVSLFAWRLLRNRLPT 242


>ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula]
            gi|355501725|gb|AES82928.1| Receptor-like kinase
            [Medicago truncatula]
          Length = 2313

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 4/147 (2%)
 Frame = -2

Query: 433  KVGNGSSTRFWIDCWTGSCPLKDQFPNLFRIESNKLCLVAD--RYDFENKVFDNKWKWKR 260
            +VGNG  T FW D W G  PL+ ++P LF +  NK C VAD  R  +E++     W W+R
Sbjct: 1472 EVGNGLGTLFWHDHWVGESPLRYKYPRLFDLAVNKDCTVADMERDGWEDE--GGVWVWRR 1529

Query: 259  APGSNDTSAEWERLQGTMEGIKLGRESDKWVWNVKENNDFSVAAIKRLLTS--DTVPRSR 86
               + +  +  E        +      DKW W +   + +SV    R + S  D + RS 
Sbjct: 1530 RLLAWEEESVRECSLLLHNFVLQVNIFDKWRWTLDTVHGYSVREAYRFIVSHGDHLDRSS 1589

Query: 85   VVVEWVKWVPSKCNILWWRILLNRIPT 5
            V   W  ++PSK ++  WR+L NR+PT
Sbjct: 1590 VDKVWHNYIPSKVSLFVWRLLRNRLPT 1616


>emb|CCA66198.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 53/150 (35%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
 Frame = -2

Query: 433  KVGNGSSTRFWIDCWTGSCPLKDQFPNLFRIESNKLCLVADRYDFENKVFDNKWK----W 266
            +V NG STRFW D W  +  LK QFP LF I    L +V+    F+     N+W+    W
Sbjct: 929  RVSNGESTRFWHDIWIDNSALKFQFPRLFLIAEQPLAVVSSMGQFQG----NEWRWLIPW 984

Query: 265  KRAPGSNDTSAEWERLQGTMEGIKLGRE-SDKWVWNVKENNDFSVAAI-KRLLTSDTVPR 92
             R   S D   EWE L   ++ IK+ +E  D  +W   ++  FSV +   +L  S  +  
Sbjct: 985  SRELRSRD-QVEWETLCSLLQNIKISKEGEDVLIWRHDKSGIFSVKSFYSKLSQSSGLTV 1043

Query: 91   SRVVVE-WVKWVPSKCNILWWRILLNRIPT 5
             RVV   W   VP +  + +W  LL RI T
Sbjct: 1044 ERVVPRLWKGLVPYRIEVFFWLALLERINT 1073


>gb|AAN04214.1| Putative retroelement [Oryza sativa Japonica Group]
           gi|31430304|gb|AAP52238.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 764

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
 Frame = -2

Query: 439 SCKVGNGSSTRFWIDCWTGSCPLKDQFPNLFRIESNK------LCLVADRYDFENKVFDN 278
           S KVGNG +T FW D W G  PLK Q+PN++R+ ++K      +CL  D Y         
Sbjct: 460 SYKVGNGKATNFWSDVWIGETPLKTQYPNIYRMCADKEKTVSQMCLEGDWY--------- 510

Query: 277 KWKWKRAPGSNDTSAEWERLQGTMEGIKLGRESDKWVWNVKENNDFSVAAIKRLLTSDTV 98
             + +R+ G  D + EW  L  T   I L  E D  +W + +N  +    + + L+   V
Sbjct: 511 -IELRRSLGERDLN-EWNDLHNTPREIHLKEERDCIIWKLTKNGFYKAKTLYQALSFGGV 568

Query: 97  PRSRVVVEWVKWVPSKCNILWWRILLNRI 11
               +   W   +P K  IL+W +L  RI
Sbjct: 569 KDKVMQDLWRSSIPLKVKILFWLMLKGRI 597


>gb|EAZ15378.1| hypothetical protein OsJ_30792 [Oryza sativa Japonica Group]
          Length = 338

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
 Frame = -2

Query: 439 SCKVGNGSSTRFWIDCWTGSCPLKDQFPNLFRIESNK------LCLVADRYDFENKVFDN 278
           S KVGNG +T FW D W G  PLK Q+PN++R+ ++K      +CL  D Y         
Sbjct: 34  SYKVGNGKATNFWSDVWIGETPLKTQYPNIYRMCADKEKTVSQMCLEGDWY--------- 84

Query: 277 KWKWKRAPGSNDTSAEWERLQGTMEGIKLGRESDKWVWNVKENNDFSVAAIKRLLTSDTV 98
             + +R+ G  D + EW  L  T   I L  E D  +W + +N  +    + + L+   V
Sbjct: 85  -IELRRSLGERDLN-EWNDLHNTPREIHLKEERDCIIWKLTKNGFYKAKTLYQALSFGGV 142

Query: 97  PRSRVVVEWVKWVPSKCNILWWRILLNRI 11
               +   W   +P K  IL+W +L  RI
Sbjct: 143 KDKVMQDLWRSSIPLKVKILFWLMLKGRI 171


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