BLASTX nr result

ID: Atractylodes22_contig00035613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035613
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37296.3| unnamed protein product [Vitis vinifera]               83   2e-16
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]    84   5e-16
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                    82   6e-16
emb|CAN66690.1| hypothetical protein VITISV_023209 [Vitis vinifera]    79   2e-15
emb|CAN78427.1| hypothetical protein VITISV_001243 [Vitis vinifera]    80   2e-15

>emb|CBI37296.3| unnamed protein product [Vitis vinifera]
          Length = 3048

 Score = 82.8 bits (203), Expect(2) = 2e-16
 Identities = 46/108 (42%), Positives = 64/108 (59%), Gaps = 8/108 (7%)
 Frame = +3

Query: 51  CHRSHRGRQYTSQAFHAFCNVHGIK---SPSYTPQQNGVVECKNQTLMNMVQYL-----L 206
           C R+ RG ++TSQ F  FC+VHGI+   + +YTPQQNGV E KN+T+MNMV+ +     L
Sbjct: 578 CLRTDRGGEFTSQEFAIFCDVHGIRRQLTAAYTPQQNGVAERKNRTIMNMVRSMLSAKKL 637

Query: 207 PKSLWVDATKXXXXXXXXXXXXXXXXKDKTPEEGRSGSKPSVAHFKIF 350
           PK+ W +A                  ++KTPEE     KPSV +F++F
Sbjct: 638 PKTFWPEAVN--WTVHVLNRSPTFAVQNKTPEEAWGKLKPSVDYFRVF 683



 Score = 27.3 bits (59), Expect(2) = 2e-16
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 361 HVPDKRRIKLEDKSHKSV 414
           HVPD +R KL+DKS   V
Sbjct: 690 HVPDSKRTKLDDKSFSCV 707


>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score = 84.0 bits (206), Expect(2) = 5e-16
 Identities = 48/106 (45%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
 Frame = +3

Query: 57  RSHRGRQYTSQAFHAFCNVHGIK---SPSYTPQQNGVVECKNQTLMNMVQYLL-----PK 212
           R+ RG ++TS  F +FCN +GI    + +YTPQQNGV E KN+T+MNMV+ +L     PK
Sbjct: 314 RTDRGGEFTSNEFTSFCNENGILRQLTAAYTPQQNGVAERKNRTIMNMVRSMLSEKQIPK 373

Query: 213 SLWVDATKXXXXXXXXXXXXXXXXKDKTPEEGRSGSKPSVAHFKIF 350
           + W +A                  K+KTPEE  SG KPSV HF+IF
Sbjct: 374 TFWPEAVN--WTVHVLNRSPTLAVKNKTPEEAWSGRKPSVDHFRIF 417



 Score = 25.0 bits (53), Expect(2) = 5e-16
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 361 HVPDKRRIKLEDKSHKSV 414
           HVPD +R+KL+ KS + +
Sbjct: 424 HVPDHKRVKLDAKSLRCI 441


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score = 82.4 bits (202), Expect(2) = 6e-16
 Identities = 48/116 (41%), Positives = 68/116 (58%), Gaps = 8/116 (6%)
 Frame = +3

Query: 39  LSICCHRSHRGRQYTSQAFHAFCNVHGIK---SPSYTPQQNGVVECKNQTLMNMVQYLL- 206
           LSI C R+ RG ++TS  F+ FC   GIK   + +Y+PQQNGV E +N+T+MN+V+ +L 
Sbjct: 423 LSILCLRTDRGGEFTSIEFNEFCKSSGIKRQLTAAYSPQQNGVAERRNRTIMNLVRSVLS 482

Query: 207 ----PKSLWVDATKXXXXXXXXXXXXXXXXKDKTPEEGRSGSKPSVAHFKIFEYVA 362
               PKS W +A K                +D TPEE  SG KP+V +F++F  +A
Sbjct: 483 EKRVPKSYWPEAVK--WITHVLNRSPTLVVQDVTPEEAWSGIKPNVDYFRVFGCIA 536



 Score = 26.2 bits (56), Expect(2) = 6e-16
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 361 HVPDKRRIKLEDKSHKSV 414
           H+PD +R K +DKS K V
Sbjct: 539 HIPDAKRTKFDDKSCKCV 556


>emb|CAN66690.1| hypothetical protein VITISV_023209 [Vitis vinifera]
          Length = 1202

 Score = 79.3 bits (194), Expect(2) = 2e-15
 Identities = 50/115 (43%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
 Frame = +3

Query: 42  SICCHRSHRGRQYTSQAFHAFCNVHGIK---SPSYTPQQNGVVECKNQTLMNMVQYLL-- 206
           SI   R+ RG +Y S  F  FC+  GI+   + +YTPQQNGV E KN+T++NMV+ LL  
Sbjct: 481 SIKILRTDRGGEYCSNEFEHFCDDQGIRRELTAAYTPQQNGVSERKNRTILNMVRSLLAR 540

Query: 207 ---PKSLWVDATKXXXXXXXXXXXXXXXXKDKTPEEGRSGSKPSVAHFKIFEYVA 362
              PKS W +A                  ++ TPEE  SG KP+V HFKIF  +A
Sbjct: 541 GKIPKSFWPEAVN--WSIHVLNRSPTFXVQNMTPEEAWSGXKPAVDHFKIFGCIA 593



 Score = 27.7 bits (60), Expect(2) = 2e-15
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +1

Query: 361 HVPDKRRIKLEDKSHKSV 414
           HVPD++R KL+DK  K V
Sbjct: 596 HVPDEKRKKLDDKGEKCV 613


>emb|CAN78427.1| hypothetical protein VITISV_001243 [Vitis vinifera]
          Length = 1770

 Score = 79.7 bits (195), Expect(2) = 2e-15
 Identities = 49/110 (44%), Positives = 64/110 (58%), Gaps = 8/110 (7%)
 Frame = +3

Query: 45   ICCHRSHRGRQYTSQAFHAFCNVHGIK---SPSYTPQQNGVVECKNQTLMNMVQYLL--- 206
            I C R  RG ++TSQ F+ F N +GIK   + +YTPQQNGV E KN+T+MNMVQ +L   
Sbjct: 1110 IKCLRIDRGGEFTSQDFNEFGNENGIKRQLTAAYTPQQNGVAE-KNRTIMNMVQSMLSKK 1168

Query: 207  --PKSLWVDATKXXXXXXXXXXXXXXXXKDKTPEEGRSGSKPSVAHFKIF 350
              PK+ W +A                  K+ TPEE  SG KPS+ HF++F
Sbjct: 1169 KRPKTFWPEAVNWIVHILNRCPTLPV--KNMTPEETWSGVKPSIEHFRVF 1216



 Score = 26.9 bits (58), Expect(2) = 2e-15
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +1

Query: 361  HVPDKRRIKLEDKSHKSV 414
            HVPD +R KLEDKS   V
Sbjct: 1223 HVPDIKRTKLEDKSFTCV 1240


Top