BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035575
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001063866.1| Os09g0551200 [Oryza sativa Japonica Group] g...   108   3e-22
gb|ABA96315.1| retrotransposon protein, putative, Ty1-copia subc...   105   5e-21
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...    94   9e-18
gb|ABA97288.1| retrotransposon protein, putative, Ty1-copia subc...    92   3e-17
ref|NP_001044989.1| Os01g0879800 [Oryza sativa Japonica Group] g...    92   3e-17

>ref|NP_001063866.1| Os09g0551200 [Oryza sativa Japonica Group]
           gi|113632099|dbj|BAF25780.1| Os09g0551200 [Oryza sativa
           Japonica Group]
          Length = 280

 Score =  108 bits (271), Expect = 3e-22
 Identities = 56/122 (45%), Positives = 76/122 (62%)
 Frame = -2

Query: 373 LGETLEDKILVRKLLNSVPKKFLPIVASIEQYQDLDKMTFEEAVGRLIAFEERLKSHDED 194
           LG T+ D  LV+KLL+SVP+KFL I+A+IEQ+ DLD M FEEA+GRL AFEER++ H ++
Sbjct: 153 LGATMTDDELVKKLLDSVPEKFLHIIAAIEQFCDLDTMPFEEAIGRLKAFEERIRKHSDN 212

Query: 193 EGNYQDNLLMARSSNQGHGRGRGRNFNKGEKSRGRDIHQRERDKKDLKCYRCNNYGHLGY 14
           +G  +  LL  R+++ G GR RG+ F                DK  + CY C   GH  +
Sbjct: 213 DG--EQLLLTTRNTDDGAGRARGKRF----------------DKSKVMCYHCQELGHFAF 254

Query: 13  EC 8
           EC
Sbjct: 255 EC 256


>gb|ABA96315.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 271

 Score =  105 bits (261), Expect = 5e-21
 Identities = 55/122 (45%), Positives = 74/122 (60%)
 Frame = -2

Query: 373 LGETLEDKILVRKLLNSVPKKFLPIVASIEQYQDLDKMTFEEAVGRLIAFEERLKSHDED 194
           LG T+ D  LV+KLL+SVP+KFL I+A+IEQ+ DLD M FEEA+GRL AFEER++ H ++
Sbjct: 144 LGATMTDDELVKKLLDSVPEKFLHIIAAIEQFCDLDTMPFEEAIGRLKAFEERIRKHSDN 203

Query: 193 EGNYQDNLLMARSSNQGHGRGRGRNFNKGEKSRGRDIHQRERDKKDLKCYRCNNYGHLGY 14
            G  +  LL  R+++ G GR R + F                DK  + CY C   GH  +
Sbjct: 204 YG--EQLLLTTRNTDDGAGRARSKRF----------------DKSKVMCYHCQELGHFAF 245

Query: 13  EC 8
           EC
Sbjct: 246 EC 247


>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 51/129 (39%), Positives = 76/129 (58%), Gaps = 7/129 (5%)
 Frame = -2

Query: 373 LGETLEDKILVRKLLNSVPKKFLPIVASIEQYQDLDKMTFEEAVGRLIAFEERLKSHDED 194
           LG T+E+  LV+K L+ +P KFL + A++EQ  DL+   +E+ VGRL AFEERL+  +  
Sbjct: 24  LGHTIEEAKLVKKFLSCLPSKFLQLSATLEQVLDLNNTRYEDVVGRLKAFEERLRGEERM 83

Query: 193 EG-NYQDNLLMARSSNQGHGRGRGRNFNKGEKSRGRDIH---QRERDKKD---LKCYRCN 35
            G   +DN  +  S +   GRGRG N  +G + RGR      +R ++KKD   ++C+ C+
Sbjct: 84  RGEKLEDNGKLLYSDHGTKGRGRGSNRGRGNRGRGRGSSNGGERNKEKKDYSQIECFHCH 143

Query: 34  NYGHLGYEC 8
             GH    C
Sbjct: 144 KKGHFASVC 152


>gb|ABA97288.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 904

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 50/122 (40%), Positives = 70/122 (57%)
 Frame = -2

Query: 373 LGETLEDKILVRKLLNSVPKKFLPIVASIEQYQDLDKMTFEEAVGRLIAFEERLKSHDED 194
           LG T++D   V+KLL+SVP KFL ++A+IEQ+ DLD M F+EA+GRL A+EER++  D+ 
Sbjct: 566 LGVTMDDDEQVKKLLDSVPDKFLHVIAAIEQFSDLDSMPFDEAIGRLKAYEERIRKRDDK 625

Query: 193 EGNYQDNLLMARSSNQGHGRGRGRNFNKGEKSRGRDIHQRERDKKDLKCYRCNNYGHLGY 14
            G   ++LL                F  G+ S GR    ++ D+    CY C   GH  Y
Sbjct: 626 NG---EHLL----------------FTSGDTSGGRS-RVKKPDRSKTMCYYCQELGHFAY 665

Query: 13  EC 8
           EC
Sbjct: 666 EC 667


>ref|NP_001044989.1| Os01g0879800 [Oryza sativa Japonica Group]
           gi|113534520|dbj|BAF06903.1| Os01g0879800 [Oryza sativa
           Japonica Group]
          Length = 278

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 50/122 (40%), Positives = 70/122 (57%)
 Frame = -2

Query: 373 LGETLEDKILVRKLLNSVPKKFLPIVASIEQYQDLDKMTFEEAVGRLIAFEERLKSHDED 194
           LG T++D   V+KLL+SVP KFL ++A+IEQ+ DLD M F+EA+GRL A+EER++  D+ 
Sbjct: 153 LGVTMDDDEQVKKLLDSVPDKFLHVIAAIEQFSDLDSMPFDEAIGRLKAYEERIRKRDDK 212

Query: 193 EGNYQDNLLMARSSNQGHGRGRGRNFNKGEKSRGRDIHQRERDKKDLKCYRCNNYGHLGY 14
            G   ++LL                F  G+ S GR    ++ D+    CY C   GH  Y
Sbjct: 213 NG---EHLL----------------FTSGDTSGGRS-RVKKPDRSKTMCYYCQELGHFAY 252

Query: 13  EC 8
           EC
Sbjct: 253 EC 254