BLASTX nr result

ID: Atractylodes22_contig00035521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035521
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containi...   128   4e-28
emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]   128   4e-28
ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002527601.1| pentatricopeptide repeat-containing protein,...   114   8e-24
ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23

>ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/92 (66%), Positives = 75/92 (81%)
 Frame = -2

Query: 277 HLISLHARLGNKDDVVRLWGLQKTACKRQINRDYITMVKSLVGLGEFEEAKKLLVEWHSS 98
           HLISL+A LGNK +V+RLW L+K+ACKR INRDYITM++SLV LGE EEA+K+L EW SS
Sbjct: 286 HLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEAEKVLREWESS 345

Query: 97  GNCYDFRVPCFIIDGYLEKGLCDEGKDLLDNL 2
           GNCYDFRVP  +I GY EKGL ++ + +L  L
Sbjct: 346 GNCYDFRVPNIVIIGYSEKGLFEKAEAMLKEL 377


>emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
          Length = 506

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/92 (66%), Positives = 75/92 (81%)
 Frame = -2

Query: 277 HLISLHARLGNKDDVVRLWGLQKTACKRQINRDYITMVKSLVGLGEFEEAKKLLVEWHSS 98
           HLISL+A LGNK +V+RLW L+K+ACKR INRDYITM++SLV LGE EEA+K+L EW SS
Sbjct: 286 HLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEAEKVLREWESS 345

Query: 97  GNCYDFRVPCFIIDGYLEKGLCDEGKDLLDNL 2
           GNCYDFRVP  +I GY EKGL ++ + +L  L
Sbjct: 346 GNCYDFRVPNIVIIGYSEKGLFEKAEAMLKEL 377


>ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|222848105|gb|EEE85652.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  124 bits (311), Expect = 8e-27
 Identities = 58/92 (63%), Positives = 75/92 (81%)
 Frame = -2

Query: 277 HLISLHARLGNKDDVVRLWGLQKTACKRQINRDYITMVKSLVGLGEFEEAKKLLVEWHSS 98
           HLISL+A+LGNK +V+RLW L+K+AC+R IN+DYI M++SL+ L EFEEA+K+L EW SS
Sbjct: 276 HLISLYAKLGNKTEVLRLWDLEKSACERHINKDYIIMMESLLKLSEFEEAEKMLKEWESS 335

Query: 97  GNCYDFRVPCFIIDGYLEKGLCDEGKDLLDNL 2
           GN YD RVP  +I GY  KGLC++ K LL+NL
Sbjct: 336 GNFYDVRVPNTLIIGYSRKGLCEKAKALLENL 367


>ref|XP_002527601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533018|gb|EEF34782.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 502

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/92 (58%), Positives = 71/92 (77%)
 Frame = -2

Query: 277 HLISLHARLGNKDDVVRLWGLQKTACKRQINRDYITMVKSLVGLGEFEEAKKLLVEWHSS 98
           HLISL+A LG KD+V+RLWGL KT CK+Q+NRDYITM+ +LV L E EEA KLL EW SS
Sbjct: 281 HLISLNASLGIKDEVMRLWGLVKTKCKKQVNRDYITMLGALVKLEELEEADKLLQEWESS 340

Query: 97  GNCYDFRVPCFIIDGYLEKGLCDEGKDLLDNL 2
             CYDFRVP  ++ GY ++GL ++ + +L ++
Sbjct: 341 CQCYDFRVPNVLLIGYCQQGLIEKAEAMLKDI 372


>ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial-like [Glycine max]
          Length = 486

 Score =  112 bits (281), Expect = 2e-23
 Identities = 51/92 (55%), Positives = 72/92 (78%)
 Frame = -2

Query: 277 HLISLHARLGNKDDVVRLWGLQKTACKRQINRDYITMVKSLVGLGEFEEAKKLLVEWHSS 98
           HLISL+A+LG K++V+R+W L+K ACKR INRD+ T+++SLV LGE +EA+K+L EW SS
Sbjct: 268 HLISLYAQLGLKNEVMRIWDLEKNACKRCINRDFTTLLESLVKLGELDEAEKILKEWESS 327

Query: 97  GNCYDFRVPCFIIDGYLEKGLCDEGKDLLDNL 2
            NCYDF +P  +I GY +KGL ++   +L+ L
Sbjct: 328 DNCYDFGIPSIVIIGYSQKGLHEKALAMLEEL 359


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