BLASTX nr result

ID: Atractylodes22_contig00035477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035477
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH03797.1| Gty37 protein [Gerbera hybrid cultivar]                80   1e-13
gb|AFL91222.1| cell wall protein, partial [Helianthus annuus]          56   3e-06
gb|AFL91218.1| cell wall protein, partial [Helianthus annuus] gi...    56   3e-06
gb|AFL91221.1| cell wall protein, partial [Helianthus annuus]          55   8e-06
gb|AFL91220.1| cell wall protein, partial [Helianthus annuus] gi...    55   8e-06

>emb|CAH03797.1| Gty37 protein [Gerbera hybrid cultivar]
          Length = 139

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/74 (56%), Positives = 47/74 (63%), Gaps = 11/74 (14%)
 Frame = +3

Query: 126 NLKRPDGVKQPDSFINHDPGYLIPGVGRAIKPKCKDGF-----NPVIGGNDGIIGQVPII 290
           NLK+ D VK PD F  HD GYL+PG+GR IKPKCKDGF     NPV GGN+GI    P +
Sbjct: 15  NLKKRDDVKHPDMFFMHDRGYLVPGIGRGIKPKCKDGFNPFTYNPVTGGNNGIPVTFPGV 74

Query: 291 ------GYVPGGDD 314
                 G V GGDD
Sbjct: 75  GGSVGGGNVGGGDD 88


>gb|AFL91222.1| cell wall protein, partial [Helianthus annuus]
          Length = 91

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 12/63 (19%)
 Frame = +3

Query: 162 SFINHDPGYLIPGVGRAIKPKCKDGFNPV-----IGGNDGIIG-QVPIIG------YVPG 305
           S + +D GYLIPGVGR I PK  +GFNPV      G N+G  G  VP +G      Y+PG
Sbjct: 2   SLLYYDRGYLIPGVGRGITPKPNEGFNPVTYNPITGSNNGFPGITVPSVGGLGGGNYLPG 61

Query: 306 GDD 314
           GDD
Sbjct: 62  GDD 64


>gb|AFL91218.1| cell wall protein, partial [Helianthus annuus]
           gi|390430813|gb|AFL91224.1| cell wall protein, partial
           [Helianthus annuus]
          Length = 91

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 12/63 (19%)
 Frame = +3

Query: 162 SFINHDPGYLIPGVGRAIKPKCKDGFNPV-----IGGNDGIIG-QVPIIG------YVPG 305
           S + +D GYLIPGVGR I PK  +GFNPV      G N+G  G  VP +G      Y+PG
Sbjct: 2   SXLYYDRGYLIPGVGRGITPKPNEGFNPVTYNPITGSNNGFPGITVPSVGGLGGGNYLPG 61

Query: 306 GDD 314
           GDD
Sbjct: 62  GDD 64


>gb|AFL91221.1| cell wall protein, partial [Helianthus annuus]
          Length = 88

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/59 (52%), Positives = 36/59 (61%), Gaps = 12/59 (20%)
 Frame = +3

Query: 174 HDPGYLIPGVGRAIKPKCKDGFNPV-----IGGNDGIIG-QVPIIG------YVPGGDD 314
           +D GYLIPGVGR I PK  +GFNPV      G N+G  G  VP +G      Y+PGGDD
Sbjct: 3   YDRGYLIPGVGRGITPKPNEGFNPVTYNPITGSNNGFPGITVPSVGGLGGGNYLPGGDD 61


>gb|AFL91220.1| cell wall protein, partial [Helianthus annuus]
           gi|390430815|gb|AFL91225.1| cell wall protein, partial
           [Helianthus annuus]
          Length = 87

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/59 (52%), Positives = 36/59 (61%), Gaps = 12/59 (20%)
 Frame = +3

Query: 174 HDPGYLIPGVGRAIKPKCKDGFNPV-----IGGNDGIIG-QVPIIG------YVPGGDD 314
           +D GYLIPGVGR I PK  +GFNPV      G N+G  G  VP +G      Y+PGGDD
Sbjct: 3   YDRGYLIPGVGRGITPKPNEGFNPVTYNPITGSNNGFPGITVPSVGGLGGGNYLPGGDD 61


Top