BLASTX nr result

ID: Atractylodes22_contig00035476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035476
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF19687.1|AC009519_21 F1N19.18 [Arabidopsis thaliana]              64   7e-09
ref|XP_002263491.2| PREDICTED: uncharacterized protein LOC100249...    64   2e-08
emb|CBI34556.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_002518879.1| WD-repeat protein, putative [Ricinus communi...    59   3e-07
ref|XP_001761107.1| predicted protein [Physcomitrella patens sub...    59   3e-07

>gb|AAF19687.1|AC009519_21 F1N19.18 [Arabidopsis thaliana]
          Length = 667

 Score = 64.3 bits (155), Expect(2) = 7e-09
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = +1

Query: 91  LLPQYDAVTCVEFNPMNDNYFISGSIDGKVRIWDMHR 201
           LL QY A+TCV FNP++DNYFISGSIDGKVRIWD+ R
Sbjct: 367 LLLQYIALTCVAFNPVDDNYFISGSIDGKVRIWDVTR 403



 Score = 20.4 bits (41), Expect(2) = 7e-09
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 3   FTQNNYGECWSVYI 44
           FT NN+GE    YI
Sbjct: 359 FTHNNFGELLLQYI 372


>ref|XP_002263491.2| PREDICTED: uncharacterized protein LOC100249640 [Vitis vinifera]
          Length = 729

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = +1

Query: 106 DAVTCVEFNPMNDNYFISGSIDGKVRIWDMHR 201
           D VTCV+FNP++DNYFISGSIDGKVRIW++HR
Sbjct: 419 DYVTCVDFNPVDDNYFISGSIDGKVRIWEVHR 450


>emb|CBI34556.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = +1

Query: 106 DAVTCVEFNPMNDNYFISGSIDGKVRIWDMHR 201
           D VTCV+FNP++DNYFISGSIDGKVRIW++HR
Sbjct: 383 DYVTCVDFNPVDDNYFISGSIDGKVRIWEVHR 414


>ref|XP_002518879.1| WD-repeat protein, putative [Ricinus communis]
           gi|223541866|gb|EEF43412.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 743

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = +1

Query: 112 VTCVEFNPMNDNYFISGSIDGKVRIWDMHR 201
           VTCV+FNPM+DNYFISGSIDGKVRIW++ R
Sbjct: 420 VTCVDFNPMDDNYFISGSIDGKVRIWEVIR 449


>ref|XP_001761107.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162687793|gb|EDQ74174.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 328

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 5/51 (9%)
 Frame = +1

Query: 58  DKSVSVVHMSY-----LLPQYDAVTCVEFNPMNDNYFISGSIDGKVRIWDM 195
           DK+V + H+SY     + P  D VTC +FNP++D YF+SGS+D KVRIW +
Sbjct: 2   DKTVRLWHISYDECLRIFPHNDYVTCAQFNPLDDRYFLSGSLDDKVRIWSI 52


Top