BLASTX nr result

ID: Atractylodes22_contig00035399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035399
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation spec...   297   1e-78
gb|ABK21275.1| unknown [Picea sitchensis]                             296   3e-78
ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, p...   295   4e-78
ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation spec...   295   7e-78
gb|AFK44906.1| unknown [Medicago truncatula]                          294   1e-77

>ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 isoform 1 [Vitis vinifera]
           gi|297745235|emb|CBI40315.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  297 bits (761), Expect = 1e-78
 Identities = 139/143 (97%), Positives = 141/143 (98%)
 Frame = +2

Query: 41  VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSSGLQPDWQIGEC 220
           VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANS  LQPDWQIGEC
Sbjct: 56  VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSLALQPDWQIGEC 115

Query: 221 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 400
           VAIWWRPNFETIMYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDN
Sbjct: 116 VAIWWRPNFETIMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDN 175

Query: 401 VQRYGPVISTIPQQLSRFQFNMI 469
           VQRYGPVISTIPQQLSRFQFNM+
Sbjct: 176 VQRYGPVISTIPQQLSRFQFNMM 198


>gb|ABK21275.1| unknown [Picea sitchensis]
          Length = 177

 Score =  296 bits (757), Expect = 3e-78
 Identities = 136/144 (94%), Positives = 142/144 (98%)
 Frame = +2

Query: 41  VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSSGLQPDWQIGEC 220
           VQEHNHPHILLLQIGNTFCKLPGGRLKPGENE+EGLKRKLSSKLAANS+ LQPDWQIGEC
Sbjct: 33  VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEVEGLKRKLSSKLAANSTTLQPDWQIGEC 92

Query: 221 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 400
           VA+WWRPNFET+MYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN
Sbjct: 93  VAVWWRPNFETLMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 152

Query: 401 VQRYGPVISTIPQQLSRFQFNMIH 472
           VQRYGPVISTIPQQLSRF FNM++
Sbjct: 153 VQRYGPVISTIPQQLSRFTFNMVN 176


>ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223549917|gb|EEF51404.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 200

 Score =  295 bits (756), Expect = 4e-78
 Identities = 139/145 (95%), Positives = 140/145 (96%)
 Frame = +2

Query: 41  VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSSGLQPDWQIGEC 220
           VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKL ANS  L PDWQIGEC
Sbjct: 56  VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGEC 115

Query: 221 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 400
           VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN
Sbjct: 116 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 175

Query: 401 VQRYGPVISTIPQQLSRFQFNMIHT 475
           VQRYGPVISTIPQQLSRFQFNMI T
Sbjct: 176 VQRYGPVISTIPQQLSRFQFNMITT 200


>ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449480168|ref|XP_004155818.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 200

 Score =  295 bits (754), Expect = 7e-78
 Identities = 137/145 (94%), Positives = 140/145 (96%)
 Frame = +2

Query: 41  VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSSGLQPDWQIGEC 220
           VQEH HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKL ANS  LQPDWQIGEC
Sbjct: 56  VQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDWQIGEC 115

Query: 221 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 400
           VAIWWRPNFET+MYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDN
Sbjct: 116 VAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDN 175

Query: 401 VQRYGPVISTIPQQLSRFQFNMIHT 475
           VQRYGPVISTIPQQLSRFQFNMI T
Sbjct: 176 VQRYGPVISTIPQQLSRFQFNMITT 200


>gb|AFK44906.1| unknown [Medicago truncatula]
          Length = 200

 Score =  294 bits (753), Expect = 1e-77
 Identities = 138/143 (96%), Positives = 139/143 (97%)
 Frame = +2

Query: 41  VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSSGLQPDWQIGEC 220
           VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKL ANS GL PDWQIGEC
Sbjct: 56  VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPGLVPDWQIGEC 115

Query: 221 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 400
           VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN
Sbjct: 116 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 175

Query: 401 VQRYGPVISTIPQQLSRFQFNMI 469
           VQRYGPVISTIPQQLSRFQF MI
Sbjct: 176 VQRYGPVISTIPQQLSRFQFKMI 198


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