BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035252
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA22288.1| polyprotein [Oryza australiensis]                     130   8e-29
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   124   8e-27
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   122   3e-26
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   122   3e-26
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     122   3e-26

>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  130 bits (328), Expect = 8e-29
 Identities = 63/131 (48%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
 Frame = -1

Query: 391 SLRSIID-QKLMGANFLEWQRLLKVILKQDRKYYVLXXXXXXXXXXNTSAEVRMAYDKYQ 215
           +LRSI++ +KL G NF++W R L+++LKQ+RK YVL          N +A  R  ++K+ 
Sbjct: 11  NLRSILEKEKLNGTNFMDWYRNLRIVLKQERKEYVLEVPYPEELPNNATATARRGFEKHT 70

Query: 214 TDAVDVACLMLGTMSPEFLRDYEEMDAWGIITSLRTMFQKQAKQERFDTVNAFFSCKMQE 35
            DA+D++CLML TMSPE  + YE  DA   I  LR MF+ QA+ ERF+T  + F+C++ E
Sbjct: 71  NDALDISCLMLATMSPELQKQYESSDAHTTIQGLRGMFENQARDERFNTSKSLFACRLVE 130

Query: 34  GSPVSPHVLKM 2
           G+PVSPHV+KM
Sbjct: 131 GNPVSPHVIKM 141


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score =  124 bits (311), Expect = 8e-27
 Identities = 61/131 (46%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
 Frame = -1

Query: 391 SLRSIID-QKLMGANFLEWQRLLKVILKQDRKYYVLXXXXXXXXXXNTSAEVRMAYDKYQ 215
           +LRSI++ +KL G NF++W R L+++L+Q+ K +VL          N  A  R  ++K  
Sbjct: 89  NLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTESFPANLPNNALAAQRREHEKRC 148

Query: 214 TDAVDVACLMLGTMSPEFLRDYEEMDAWGIITSLRTMFQKQAKQERFDTVNAFFSCKMQE 35
            D +D++CLML TMSPE  R YE +DA  IIT LR MF+ QA+ ERF+T  + F+C++ E
Sbjct: 149 NDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACRLAE 208

Query: 34  GSPVSPHVLKM 2
           G+PVSPHV+K+
Sbjct: 209 GNPVSPHVIKI 219


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1248

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/131 (46%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
 Frame = -1

Query: 391 SLRSIID-QKLMGANFLEWQRLLKVILKQDRKYYVLXXXXXXXXXXNTSAEVRMAYDKYQ 215
           +LRSI++ +KL G NF++W R L+++L+Q+ K +VL          N  A  R  ++K  
Sbjct: 77  NLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLPNNAPAAQRREHEKRC 136

Query: 214 TDAVDVACLMLGTMSPEFLRDYEEMDAWGIITSLRTMFQKQAKQERFDTVNAFFSCKMQE 35
            D +D++CLML TMSPE  R YE +DA  IIT LR MF+ QA+ ERF+T  + F+C++ E
Sbjct: 137 NDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACRLAE 196

Query: 34  GSPVSPHVLKM 2
           G+ VSPHV+KM
Sbjct: 197 GNLVSPHVIKM 207


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score =  122 bits (306), Expect = 3e-26
 Identities = 60/131 (45%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
 Frame = -1

Query: 391 SLRSIID-QKLMGANFLEWQRLLKVILKQDRKYYVLXXXXXXXXXXNTSAEVRMAYDKYQ 215
           +LRSI++ +KL G N ++W R L+++L+Q+ K +VL          N  A  R  ++K  
Sbjct: 10  NLRSILEKEKLTGTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRREHEKRC 69

Query: 214 TDAVDVACLMLGTMSPEFLRDYEEMDAWGIITSLRTMFQKQAKQERFDTVNAFFSCKMQE 35
            D +D++CLML TMSPE  R YE +DA  IIT LR MF+ QA+ +RF+T  + F+C++ E
Sbjct: 70  NDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAKRFNTSKSLFACRLAE 129

Query: 34  GSPVSPHVLKM 2
           G+PVSPHV+KM
Sbjct: 130 GNPVSPHVIKM 140


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/131 (46%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
 Frame = -1

Query: 391 SLRSIID-QKLMGANFLEWQRLLKVILKQDRKYYVLXXXXXXXXXXNTSAEVRMAYDKYQ 215
           +LRSI++ +KL G NF++W R L+++L+Q+ K +VL          N  A  R  ++K  
Sbjct: 10  NLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLPNNAPAAQRREHEKRC 69

Query: 214 TDAVDVACLMLGTMSPEFLRDYEEMDAWGIITSLRTMFQKQAKQERFDTVNAFFSCKMQE 35
            D +D++CLML TMSPE  R YE +DA  IIT LR MF+ QA+ ERF+T  + F+C++ E
Sbjct: 70  NDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACRLAE 129

Query: 34  GSPVSPHVLKM 2
           G+ VSPHV+KM
Sbjct: 130 GNLVSPHVIKM 140