BLASTX nr result

ID: Atractylodes22_contig00035245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035245
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519025.1| Splicing factor 3B subunit, putative [Ricinu...   251   6e-77
ref|XP_003543065.1| PREDICTED: splicing factor 3B subunit 2-like...   249   6e-77
ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like...   247   2e-76
ref|XP_003541544.1| PREDICTED: splicing factor 3B subunit 2-like...   248   3e-76
ref|XP_002316630.1| predicted protein [Populus trichocarpa] gi|2...   247   1e-75

>ref|XP_002519025.1| Splicing factor 3B subunit, putative [Ricinus communis]
           gi|223541688|gb|EEF43236.1| Splicing factor 3B subunit,
           putative [Ricinus communis]
          Length = 590

 Score =  251 bits (641), Expect(2) = 6e-77
 Identities = 112/116 (96%), Positives = 115/116 (99%)
 Frame = -1

Query: 549 PKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLREMKPGTLSHELKEALG 370
           PKMGKMDIDYQVLHDAFFKYQTKPKLT+HGDLYHEGKEFEVKLREMKPGTLS ELKE+LG
Sbjct: 272 PKMGKMDIDYQVLHDAFFKYQTKPKLTTHGDLYHEGKEFEVKLREMKPGTLSQELKESLG 331

Query: 369 MPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEFG 202
           MPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDE+G
Sbjct: 332 MPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYG 387



 Score = 62.0 bits (149), Expect(2) = 6e-77
 Identities = 30/44 (68%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
 Frame = -3

Query: 130 PPVDEFGRPVYGDVFG-QQXXXXXXXXXPVDKSKHWGDLEEEEE 2
           PPVDE+GRP+YGDVFG  Q         PVDK+KHWGDLEEEEE
Sbjct: 381 PPVDEYGRPLYGDVFGVYQQEQPNYEEEPVDKNKHWGDLEEEEE 424


>ref|XP_003543065.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 575

 Score =  249 bits (635), Expect(2) = 6e-77
 Identities = 112/116 (96%), Positives = 114/116 (98%)
 Frame = -1

Query: 549 PKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLREMKPGTLSHELKEALG 370
           PKMGKMDIDYQVLHDAFFKYQTKPKLTS GDLYHEGKEFEVKLREMKPG LSHELKEALG
Sbjct: 253 PKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYHEGKEFEVKLREMKPGMLSHELKEALG 312

Query: 369 MPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEFG 202
           MPEG+PPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDE+G
Sbjct: 313 MPEGSPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYG 368



 Score = 64.3 bits (155), Expect(2) = 6e-77
 Identities = 31/44 (70%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = -3

Query: 130 PPVDEFGRPVYGDVFG-QQXXXXXXXXXPVDKSKHWGDLEEEEE 2
           PPVDE+GRP+YGDVFG QQ         PVDK+KHWGDLEEEEE
Sbjct: 362 PPVDEYGRPLYGDVFGVQQQDQPNYEEEPVDKTKHWGDLEEEEE 405


>ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 575

 Score =  247 bits (630), Expect(2) = 2e-76
 Identities = 112/116 (96%), Positives = 113/116 (97%)
 Frame = -1

Query: 549 PKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLREMKPGTLSHELKEALG 370
           PKMGKMDIDYQVLHDAFFKYQTKPKLTS GDLYHEGKEFEVKLREMKPG LS ELKEALG
Sbjct: 253 PKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYHEGKEFEVKLREMKPGMLSQELKEALG 312

Query: 369 MPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEFG 202
           MPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDE+G
Sbjct: 313 MPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYG 368



 Score = 64.3 bits (155), Expect(2) = 2e-76
 Identities = 31/44 (70%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = -3

Query: 130 PPVDEFGRPVYGDVFG-QQXXXXXXXXXPVDKSKHWGDLEEEEE 2
           PPVDE+GRP+YGDVFG QQ         PVDK+KHWGDLEEEEE
Sbjct: 362 PPVDEYGRPLYGDVFGVQQQDQPNYEEEPVDKTKHWGDLEEEEE 405


>ref|XP_003541544.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 577

 Score =  248 bits (634), Expect(2) = 3e-76
 Identities = 112/116 (96%), Positives = 114/116 (98%)
 Frame = -1

Query: 549 PKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLREMKPGTLSHELKEALG 370
           PKMGKMDIDYQVLHDAFFKYQTKPKLTS G+LYHEGKEFEVKLREMKPG LSHELKEALG
Sbjct: 254 PKMGKMDIDYQVLHDAFFKYQTKPKLTSLGELYHEGKEFEVKLREMKPGMLSHELKEALG 313

Query: 369 MPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEFG 202
           MPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDE+G
Sbjct: 314 MPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYG 369



 Score = 62.4 bits (150), Expect(2) = 3e-76
 Identities = 30/44 (68%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
 Frame = -3

Query: 130 PPVDEFGRPVYGDVFG-QQXXXXXXXXXPVDKSKHWGDLEEEEE 2
           PPVDE+GRP+YGDVFG  Q         PVDK+KHWGDLEEEEE
Sbjct: 363 PPVDEYGRPLYGDVFGVHQQDQPNYEEEPVDKTKHWGDLEEEEE 406


>ref|XP_002316630.1| predicted protein [Populus trichocarpa] gi|222859695|gb|EEE97242.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score =  247 bits (630), Expect(2) = 1e-75
 Identities = 111/116 (95%), Positives = 113/116 (97%)
 Frame = -1

Query: 549 PKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLREMKPGTLSHELKEALG 370
           PKMGKMDIDYQVLHDAFFKYQTKPKLT HGDLYHEGKEFEVKLREMKPG+LS ELKEALG
Sbjct: 265 PKMGKMDIDYQVLHDAFFKYQTKPKLTMHGDLYHEGKEFEVKLREMKPGSLSQELKEALG 324

Query: 369 MPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEFG 202
           MPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYH GGWGKPPVDE+G
Sbjct: 325 MPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHAGGWGKPPVDEYG 380



 Score = 61.6 bits (148), Expect(2) = 1e-75
 Identities = 30/44 (68%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
 Frame = -3

Query: 130 PPVDEFGRPVYGDVFGQQ-XXXXXXXXXPVDKSKHWGDLEEEEE 2
           PPVDE+GRP+YGDVFG Q          PVDK+KHWGDLEEEEE
Sbjct: 374 PPVDEYGRPLYGDVFGVQIQDQPNYEEEPVDKTKHWGDLEEEEE 417


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