BLASTX nr result

ID: Atractylodes22_contig00035207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035207
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_194222.1| protein transport protein sec61 subunit gamma-1...    89   4e-16
ref|NP_001148682.1| protein transport protein SEC61 gamma subuni...    88   1e-15
ref|NP_001147308.1| protein transport protein SEC61 gamma subuni...    87   2e-15
ref|XP_002322263.1| predicted protein [Populus trichocarpa] gi|1...    87   2e-15
ref|XP_002318732.1| predicted protein [Populus trichocarpa] gi|1...    86   3e-15

>ref|NP_194222.1| protein transport protein sec61 subunit gamma-1 [Arabidopsis
           thaliana] gi|18423153|ref|NP_568728.1| protein transport
           protein sec61 subunit gamma-1 [Arabidopsis thaliana]
           gi|297795847|ref|XP_002865808.1| hypothetical protein
           ARALYDRAFT_495113 [Arabidopsis lyrata subsp. lyrata]
           gi|297799504|ref|XP_002867636.1| hypothetical protein
           ARALYDRAFT_492346 [Arabidopsis lyrata subsp. lyrata]
           gi|408407792|sp|P0DI74.1|S61G1_ARATH RecName:
           Full=Protein transport protein Sec61 subunit gamma-1
           gi|408407793|sp|P0DI75.1|S61G2_ARATH RecName:
           Full=Protein transport protein Sec61 subunit gamma-2
           gi|13877813|gb|AAK43984.1|AF370169_1 putative protein
           translocation complex Sec61 gamma chain [Arabidopsis
           thaliana] gi|4455235|emb|CAB36734.1| PROTEIN TRANSPORT
           PROTEIN SEC61 GAMMA SUBUNIT-like [Arabidopsis thaliana]
           gi|7269342|emb|CAB79401.1| PROTEIN TRANSPORT PROTEIN
           SEC61 GAMMA SUBUNIT-like [Arabidopsis thaliana]
           gi|9758755|dbj|BAB09131.1| protein translocation complex
           Sec61 gamma chain [Arabidopsis thaliana]
           gi|16323486|gb|AAL15237.1| putative protein
           translocation complex Sec61 gamma chain [Arabidopsis
           thaliana] gi|20466392|gb|AAM20513.1| protein transport
           protein SEC61 gamma subunit-like [Arabidopsis thaliana]
           gi|22136344|gb|AAM91250.1| protein transport protein
           SEC61 gamma subunit-like [Arabidopsis thaliana]
           gi|297311643|gb|EFH42067.1| hypothetical protein
           ARALYDRAFT_495113 [Arabidopsis lyrata subsp. lyrata]
           gi|297313472|gb|EFH43895.1| hypothetical protein
           ARALYDRAFT_492346 [Arabidopsis lyrata subsp. lyrata]
           gi|332008565|gb|AED95948.1| protein transport protein
           sec61 subunit gamma-1 [Arabidopsis thaliana]
           gi|332659576|gb|AEE84976.1| protein transport protein
           sec61 subunit gamma-1 [Arabidopsis thaliana]
          Length = 69

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 55/100 (55%), Positives = 56/100 (56%)
 Frame = -3

Query: 515 MDAIDSVIDPLRDFAKDSARLVKRCHKPDRKXXXXXXXXXXXXXXXXXXXXXXXXXXKPD 336
           MDAIDSV+DPLRDFAKDS RLVKRCHKP                               D
Sbjct: 1   MDAIDSVVDPLRDFAKDSIRLVKRCHKP-------------------------------D 29

Query: 335 RKEFTKVASRTAIXXXXXXXXXXXVKLIFIPINNIIVGAT 216
           RKEFTKVA RTAI           VKLIFIPINNIIVGAT
Sbjct: 30  RKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGAT 69


>ref|NP_001148682.1| protein transport protein SEC61 gamma subunit [Zea mays]
           gi|242096570|ref|XP_002438775.1| hypothetical protein
           SORBIDRAFT_10g026000 [Sorghum bicolor]
           gi|195609874|gb|ACG26767.1| protein transport protein
           SEC61 gamma subunit [Zea mays]
           gi|195618380|gb|ACG31020.1| protein transport protein
           SEC61 gamma subunit [Zea mays]
           gi|195621374|gb|ACG32517.1| protein transport protein
           SEC61 gamma subunit [Zea mays]
           gi|195624782|gb|ACG34221.1| protein transport protein
           SEC61 gamma subunit [Zea mays]
           gi|241916998|gb|EER90142.1| hypothetical protein
           SORBIDRAFT_10g026000 [Sorghum bicolor]
           gi|413955006|gb|AFW87655.1| hypothetical protein
           ZEAMMB73_686875 [Zea mays]
          Length = 69

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 53/99 (53%), Positives = 56/99 (56%)
 Frame = -3

Query: 515 MDAIDSVIDPLRDFAKDSARLVKRCHKPDRKXXXXXXXXXXXXXXXXXXXXXXXXXXKPD 336
           MDAIDSV+DPLRDFAKDS RLVKRCHKP                               D
Sbjct: 1   MDAIDSVVDPLRDFAKDSVRLVKRCHKP-------------------------------D 29

Query: 335 RKEFTKVASRTAIXXXXXXXXXXXVKLIFIPINNIIVGA 219
           RKEFTKVA+RTAI           VKLIFIPINNIIVG+
Sbjct: 30  RKEFTKVAARTAIGFVVMGFVGFFVKLIFIPINNIIVGS 68


>ref|NP_001147308.1| protein transport protein SEC61 gamma subunit [Zea mays]
           gi|195609738|gb|ACG26699.1| protein transport protein
           SEC61 gamma subunit [Zea mays]
           gi|413943503|gb|AFW76152.1| protein transport protein
           SEC61 gamma subunit [Zea mays]
          Length = 69

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 52/99 (52%), Positives = 56/99 (56%)
 Frame = -3

Query: 515 MDAIDSVIDPLRDFAKDSARLVKRCHKPDRKXXXXXXXXXXXXXXXXXXXXXXXXXXKPD 336
           MDA+DSV+DPLRDFAKDS RLVKRCHKP                               D
Sbjct: 1   MDAVDSVVDPLRDFAKDSVRLVKRCHKP-------------------------------D 29

Query: 335 RKEFTKVASRTAIXXXXXXXXXXXVKLIFIPINNIIVGA 219
           RKEFTKVA+RTAI           VKLIFIPINNIIVG+
Sbjct: 30  RKEFTKVAARTAIGFVVMGFVGFFVKLIFIPINNIIVGS 68


>ref|XP_002322263.1| predicted protein [Populus trichocarpa] gi|118482487|gb|ABK93166.1|
           unknown [Populus trichocarpa]
           gi|222869259|gb|EEF06390.1| predicted protein [Populus
           trichocarpa]
          Length = 69

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 53/100 (53%), Positives = 57/100 (57%)
 Frame = -3

Query: 515 MDAIDSVIDPLRDFAKDSARLVKRCHKPDRKXXXXXXXXXXXXXXXXXXXXXXXXXXKPD 336
           MDAIDSV+DPLR+FAKDS RLVKRCHK                               PD
Sbjct: 1   MDAIDSVVDPLREFAKDSVRLVKRCHK-------------------------------PD 29

Query: 335 RKEFTKVASRTAIXXXXXXXXXXXVKLIFIPINNIIVGAT 216
           +KEFTKVASRTAI           VKLIFIPINNIIVGA+
Sbjct: 30  QKEFTKVASRTAIGFVVMGFVGFFVKLIFIPINNIIVGAS 69


>ref|XP_002318732.1| predicted protein [Populus trichocarpa] gi|118482351|gb|ABK93099.1|
           unknown [Populus trichocarpa]
           gi|222859405|gb|EEE96952.1| predicted protein [Populus
           trichocarpa]
          Length = 69

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 52/100 (52%), Positives = 57/100 (57%)
 Frame = -3

Query: 515 MDAIDSVIDPLRDFAKDSARLVKRCHKPDRKXXXXXXXXXXXXXXXXXXXXXXXXXXKPD 336
           MDAIDSV+DPLR+FAKDS RLVKRCHK                               PD
Sbjct: 1   MDAIDSVVDPLREFAKDSVRLVKRCHK-------------------------------PD 29

Query: 335 RKEFTKVASRTAIXXXXXXXXXXXVKLIFIPINNIIVGAT 216
           +KEFTKVA+RTAI           VKLIFIPINNIIVGA+
Sbjct: 30  QKEFTKVATRTAIGFVVMGFVGFFVKLIFIPINNIIVGAS 69


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