BLASTX nr result

ID: Atractylodes22_contig00035127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035127
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...   113   1e-23
ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-...   106   2e-21
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-...   106   2e-21
dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea...   102   3e-20
ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19

>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546255|gb|EEF47757.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 622

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/70 (75%), Positives = 64/70 (91%)
 Frame = -1

Query: 417 ELDKMKSQDDGRDFQLQLKKATWVPHLFRVSVAPREYNNEKRQRITVRSVAPVDFAAESK 238
           ELDK+KSQ+DG  ++L+LK+ATW PHLFRVSVA  EYNNEKRQRITVR+VAP+DFAAES+
Sbjct: 550 ELDKLKSQEDGNSYELKLKEATWSPHLFRVSVAQNEYNNEKRQRITVRAVAPLDFAAESR 609

Query: 237 FLLQEISSMK 208
           FLL+EIS +K
Sbjct: 610 FLLEEISKIK 619


>ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
           partial [Cucumis sativus]
          Length = 560

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/71 (74%), Positives = 63/71 (88%), Gaps = 1/71 (1%)
 Frame = -1

Query: 417 ELDKMKSQ-DDGRDFQLQLKKATWVPHLFRVSVAPREYNNEKRQRITVRSVAPVDFAAES 241
           ELD++KSQ  +   +QL+LK+ATWVPHLFRVSV+  EYNNEKRQRITVRSVAPVDFAAES
Sbjct: 488 ELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSVAPVDFAAES 547

Query: 240 KFLLQEISSMK 208
           +FLL+EI+ MK
Sbjct: 548 RFLLEEIAKMK 558


>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 603

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/71 (74%), Positives = 63/71 (88%), Gaps = 1/71 (1%)
 Frame = -1

Query: 417 ELDKMKSQ-DDGRDFQLQLKKATWVPHLFRVSVAPREYNNEKRQRITVRSVAPVDFAAES 241
           ELD++KSQ  +   +QL+LK+ATWVPHLFRVSV+  EYNNEKRQRITVRSVAPVDFAAES
Sbjct: 531 ELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSVAPVDFAAES 590

Query: 240 KFLLQEISSMK 208
           +FLL+EI+ MK
Sbjct: 591 RFLLEEIAKMK 601


>dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
          Length = 604

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/72 (65%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
 Frame = -1

Query: 417 ELDKMKSQD-DGRDFQLQLKKATWVPHLFRVSVAPREYNNEKRQRITVRSVAPVDFAAES 241
           ELD+++SQD D   +Q++LK+ATWVP+LFRVSV P+EYNNEKRQRITVR+ APVDFAAES
Sbjct: 531 ELDRLRSQDGDSSAYQMKLKEATWVPYLFRVSVTPQEYNNEKRQRITVRAAAPVDFAAES 590

Query: 240 KFLLQEISSMKV 205
           ++ L+E++ M +
Sbjct: 591 RYFLEEMAKMNI 602


>ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|222838845|gb|EEE77196.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/70 (68%), Positives = 59/70 (84%)
 Frame = -1

Query: 417 ELDKMKSQDDGRDFQLQLKKATWVPHLFRVSVAPREYNNEKRQRITVRSVAPVDFAAESK 238
           ELD +KSQ +   +Q +LK+ATW PHL R+SV+  EYNNEKRQR+TVR+VAPVDFAAES+
Sbjct: 531 ELDLLKSQIEENTYQQRLKEATWNPHLLRISVSQNEYNNEKRQRMTVRAVAPVDFAAESR 590

Query: 237 FLLQEISSMK 208
           FLL+EIS MK
Sbjct: 591 FLLEEISKMK 600


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