BLASTX nr result

ID: Atractylodes22_contig00035090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035090
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, puta...    74   9e-12
ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...    69   4e-10
emb|CBI22513.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_004159933.1| PREDICTED: DNA repair protein REV1-like [Cuc...    64   1e-08

>ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis]
            gi|223542041|gb|EEF43585.1| terminal deoxycytidyl
            transferase rev1, putative [Ricinus communis]
          Length = 1200

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
 Frame = -1

Query: 307  EEIRDGILELLPAHRNLETVSDASLPP--HDPYHLAV----EAKPRDYSSGKQLWVGNPP 146
            +E++  IL LLPAHR LE  S++S+ P   +P  L      +  P        LW+GNPP
Sbjct: 928  DELKADILGLLPAHRRLELTSNSSMVPLTKNPQELLGITENQTMPVASVLNNDLWIGNPP 987

Query: 145  QWVEKFKSSDCQILRFFSETYSGLGSTCKLSSVL 44
            +WV+KFK S+C IL   +E Y  LGS   LSSVL
Sbjct: 988  RWVDKFKVSNCLILNSLAEMYDKLGSADNLSSVL 1021


>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 40/90 (44%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
 Frame = -1

Query: 289  ILELLPAHRNLETVSDASLPPHDPY--------HLAVEAKPRDYSSGKQLWVGNPPQWVE 134
            ILE LP HR  E  S A+L P            H    +K  D   G  LW+GNPPQWV+
Sbjct: 995  ILEQLPVHRKPEHSSSAALDPLIANAQESLCFKHTENNSKSVDSVLGNNLWIGNPPQWVD 1054

Query: 133  KFKSSDCQILRFFSETYSGLGSTCKLSSVL 44
            KFK S+C +L   +E Y   GST  LSS+L
Sbjct: 1055 KFKVSNCLLLNILAEMYYRSGSTGCLSSIL 1084


>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 40/90 (44%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
 Frame = -1

Query: 289  ILELLPAHRNLETVSDASLPPHDPY--------HLAVEAKPRDYSSGKQLWVGNPPQWVE 134
            ILE LP HR  E  S A+L P            H    +K  D   G  LW+GNPPQWV+
Sbjct: 943  ILEQLPVHRKPEHSSSAALDPLIANAQESLCFKHTENNSKSVDSVLGNNLWIGNPPQWVD 1002

Query: 133  KFKSSDCQILRFFSETYSGLGSTCKLSSVL 44
            KFK S+C +L   +E Y   GST  LSS+L
Sbjct: 1003 KFKVSNCLLLNILAEMYYRSGSTGCLSSIL 1032


>ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|222850288|gb|EEE87835.1|
            predicted protein [Populus trichocarpa]
          Length = 1191

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/98 (40%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
 Frame = -1

Query: 307  EEIRDGILELLPAHRNLETVSDASLPP--HDPYHLAVEAKPRDYSSG------KQLWVGN 152
            EE+R  IL  LPAHR  E  S+A   P   +P    +     + S+         LW+G+
Sbjct: 1003 EELRGDILGQLPAHRKQELTSNAGSHPLSENPEGTLIINITENQSNSIASVLNTNLWIGS 1062

Query: 151  PPQWVEKFKSSDCQILRFFSETYSGLGSTCKLSSVLLR 38
            PPQWV+KF  S C IL+  +E Y  LGST  LS +L R
Sbjct: 1063 PPQWVDKFTVSSCLILKTLAELYYKLGSTGSLSPILQR 1100


>ref|XP_004159933.1| PREDICTED: DNA repair protein REV1-like [Cucumis sativus]
          Length = 1032

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
 Frame = -1

Query: 307  EEIRDGILELLPAHRNLETVSDASLPPHDPYHLAVE--AKPRDYSSGKQLWVGNPPQWVE 134
            E +RD IL+ LPAHR  E   + ++         VE  +   D      LW GNPP WV+
Sbjct: 857  EPLRDDILKQLPAHRGNELSLEHAIKDQRESGSGVENTSGSVDPLMENDLWSGNPPLWVD 916

Query: 133  KFKSSDCQILRFFSETYSGLGSTCKLSSVLLRS 35
            KFK+S+C IL  F+E Y+  G    L  +LLR+
Sbjct: 917  KFKASNCLILELFAEIYTESGLPGNLYEILLRT 949


Top