BLASTX nr result

ID: Atractylodes22_contig00035062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035062
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...    69   3e-10
ref|XP_002312645.1| multidrug resistance protein ABC transporter...    67   2e-09
ref|XP_002315634.1| multidrug resistance protein ABC transporter...    64   1e-08
ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...    64   2e-08
ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3...    64   2e-08

>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223546054|gb|EEF47557.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
 Frame = +3

Query: 3   TLPFSILLCFIGV-----TSCDTXXXXXXXXXXXXXXXGDTSAFSKAGIWKRVTFNWLNP 167
           + PFSILLC + +     T   T                D+S+F+ AGIW ++TF WLNP
Sbjct: 168 SFPFSILLCCLALRFSCSTRIGTGLKQPLLQEERKRVLKDSSSFTTAGIWSQITFQWLNP 227

Query: 168 LFELGHARKLEFHHVPSIPKSETXXXXXXXXXXXXQKQKTRVSVLP 305
           LF  G  +KLE  ++P +P+SET             K+K   S LP
Sbjct: 228 LFRRGRIQKLELSNIPLVPQSETAKCSSSLLEESLGKRKNESSNLP 273


>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1361

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/106 (36%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
 Frame = +3

Query: 3   TLPFSILLCFIGVT-SCDTXXXXXXXXXXXXXXXG----DTSAFSKAGIWKRVTFNWLNP 167
           +LP  +LLCF  VT SC T                    D++ +  AGIW ++TF WLNP
Sbjct: 46  SLPLLVLLCFNAVTFSCSTKTHDDLEIPLLQEKRESLFKDSTCYRSAGIWSKLTFKWLNP 105

Query: 168 LFELGHARKLEFHHVPSIPKSETXXXXXXXXXXXXQKQKTRVSVLP 305
           LF  G   KLE  HVP +P SET             K K     LP
Sbjct: 106 LFSSGRIEKLELSHVPPVPASETAKYASSLLEDSFGKNKKETLNLP 151


>ref|XP_002315634.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222864674|gb|EEF01805.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 342

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/67 (43%), Positives = 36/67 (53%)
 Frame = +3

Query: 105 DTSAFSKAGIWKRVTFNWLNPLFELGHARKLEFHHVPSIPKSETXXXXXXXXXXXXQKQK 284
           D++ +  AGIW ++TF W+NPLF  G   KLE  HVPS+P SET             K K
Sbjct: 205 DSACYRNAGIWSKLTFRWINPLFSRGRMEKLELSHVPSVPASETAGYASSLLEDSFGKNK 264

Query: 285 TRVSVLP 305
              S LP
Sbjct: 265 NETSNLP 271


>ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member
           3-like [Cucumis sativus]
          Length = 1444

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/67 (41%), Positives = 37/67 (55%)
 Frame = +3

Query: 105 DTSAFSKAGIWKRVTFNWLNPLFELGHARKLEFHHVPSIPKSETXXXXXXXXXXXXQKQK 284
           D   F   G+W R+TF WLNPLF+ G  +KLE  H+P +P+SET            Q++K
Sbjct: 175 DGGGFISPGLWSRITFQWLNPLFKRGRNQKLELVHIPCVPQSETAEYASSLLEESLQRKK 234

Query: 285 TRVSVLP 305
              S LP
Sbjct: 235 VECSSLP 241


>ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3-like [Cucumis sativus]
          Length = 1444

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/67 (41%), Positives = 37/67 (55%)
 Frame = +3

Query: 105 DTSAFSKAGIWKRVTFNWLNPLFELGHARKLEFHHVPSIPKSETXXXXXXXXXXXXQKQK 284
           D   F   G+W R+TF WLNPLF+ G  +KLE  H+P +P+SET            Q++K
Sbjct: 175 DGGGFISPGLWSRITFQWLNPLFKRGRNQKLELVHIPCVPQSETAEYASSLLEESLQRKK 234

Query: 285 TRVSVLP 305
              S LP
Sbjct: 235 VECSSLP 241


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