BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035053
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [...   364   2e-98
ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [...   352   7e-95
ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   350   4e-94
ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [...   338   1e-90
ref|XP_002318955.1| predicted protein [Populus trichocarpa] gi|2...   325   7e-87

>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 321

 Score =  364 bits (934), Expect = 2e-98
 Identities = 179/275 (65%), Positives = 211/275 (76%), Gaps = 6/275 (2%)
 Frame = +3

Query: 135 DPKHLENYPVPLSPPLPAISKDMEXXXXXXXXXXXXXXXXXXIDVLLEDEWLVALNKPPG 314
           DP  L+NYP PLSPPLP+ISK +E                   DVL ED+WL+A+NKP G
Sbjct: 15  DPLTLQNYPTPLSPPLPSISKQIELARALSASSRSSLFTLSRSDVLYEDQWLIAVNKPQG 74

Query: 315 VYCETILASVPSLLNDSPD-ESRELGTQSKKLEFHLANRLDRDTSGVILITKSHKVAAKL 491
           VYCET+L SVP +L  S +      G +    EFHLANRLDRDTSGV++ITKSHKVA+KL
Sbjct: 75  VYCETVLESVPRVLAASAELTDPSEGAEGNPHEFHLANRLDRDTSGVMVITKSHKVASKL 134

Query: 492 VKAFTDHKVRKTYIALCVGQAPKWKKITVKSGHGRSKFGAWRVYAATDVGRILPGGSSVR 671
           VKAFTDHK++KTYIALC+G APKW+KIT+KSGHGRSKFG WRVYAA+DVG+ LPGGS+V+
Sbjct: 135 VKAFTDHKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAASDVGQTLPGGSTVK 194

Query: 672 DMETLFEVLSMNGQECYKESSELD-----IVVKEKSVIECDGNKVEVLVRAFPRSGRTHQ 836
           DMET FE+LS+NGQ  +KE SE +     +VV+EK+    D  KVE+LVRAFP+SGRTHQ
Sbjct: 195 DMETSFELLSVNGQGSFKELSEFEKDENILVVEEKAAKNADVKKVEILVRAFPQSGRTHQ 254

Query: 837 IRLHCQYLGIPIKGDVKYEGVYEWNGVVYDGHELH 941
           IRLHCQYLGI I+GDVKYEGVYEW G  YDGHELH
Sbjct: 255 IRLHCQYLGISIRGDVKYEGVYEWEGRTYDGHELH 289


>ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [Cucumis sativus]
          Length = 366

 Score =  352 bits (903), Expect = 7e-95
 Identities = 179/301 (59%), Positives = 210/301 (69%), Gaps = 6/301 (1%)
 Frame = +3

Query: 57  TSTTVFRSLLMAVQHQCDSQKTHLDKDPKHLENYPVPLSPPLPAISKDMEXXXXXXXXXX 236
           T +  F           DS +      P   ENYPVPLSPPLPAISK++E          
Sbjct: 24  TKSFCFHRFKSVSNSMTDSSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASSK 83

Query: 237 XXXXXXXXIDVLLEDEWLVALNKPPGVYCETILASVPSLLNDSPDESRELGTQSKKLEFH 416
                    DV+ EDEWL+A+NKP G+YCE +LA+VP LL DS +     G ++   E H
Sbjct: 84  SSLYALSANDVIYEDEWLIAVNKPQGIYCENVLAAVPRLLGDSANA----GIKTSLPELH 139

Query: 417 LANRLDRDTSGVILITKSHKVAAKLVKAFTDHKVRKTYIALCVGQAPKWKKITVKSGHGR 596
           LANRLDRDTSGV++ITKSHKVA+KLVKAFTDH V K+YIA CVG +PKWKKI VKSGHGR
Sbjct: 140 LANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGTSPKWKKINVKSGHGR 199

Query: 597 SKFGAWRVYAATDVGRILPGGSSVRDMETLFEVLSMNGQ------ECYKESSELDIVVKE 758
           SKFG WRVYAA DVGR LPGGS VRDMET FEVLS+NG+      + ++   E  IVV  
Sbjct: 200 SKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHT 259

Query: 759 KSVIECDGNKVEVLVRAFPRSGRTHQIRLHCQYLGIPIKGDVKYEGVYEWNGVVYDGHEL 938
           KS+++ D +K E+L+RA PRSGRTHQIRLHCQYLGIPI+GDVKYEGV EWN  +YD HEL
Sbjct: 260 KSLVDIDSHKDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHEL 319

Query: 939 H 941
           H
Sbjct: 320 H 320


>ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 1-like
           [Cucumis sativus]
          Length = 366

 Score =  350 bits (897), Expect = 4e-94
 Identities = 178/301 (59%), Positives = 209/301 (69%), Gaps = 6/301 (1%)
 Frame = +3

Query: 57  TSTTVFRSLLMAVQHQCDSQKTHLDKDPKHLENYPVPLSPPLPAISKDMEXXXXXXXXXX 236
           T +  F           DS +      P   ENYPVPLSPPLPAISK++E          
Sbjct: 24  TKSFCFHRFKSVSNSMTDSSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASSK 83

Query: 237 XXXXXXXXIDVLLEDEWLVALNKPPGVYCETILASVPSLLNDSPDESRELGTQSKKLEFH 416
                    DV+ EDEWL+A+NKP G+YCE +LA+VP LL DS +     G ++   E H
Sbjct: 84  SSLYALSANDVIYEDEWLIAVNKPQGIYCENVLAAVPRLLGDSANA----GIKTSLPELH 139

Query: 417 LANRLDRDTSGVILITKSHKVAAKLVKAFTDHKVRKTYIALCVGQAPKWKKITVKSGHGR 596
           LANRLDRDTSGV++ITKSHKVA+KLVKAFTDH V K+YIA CVG +PKW KI VKSGHGR
Sbjct: 140 LANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGTSPKWXKINVKSGHGR 199

Query: 597 SKFGAWRVYAATDVGRILPGGSSVRDMETLFEVLSMNGQ------ECYKESSELDIVVKE 758
           SKFG WRVYAA DVGR LPGGS VRDMET FEVLS+NG+      + ++   E  IVV  
Sbjct: 200 SKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHT 259

Query: 759 KSVIECDGNKVEVLVRAFPRSGRTHQIRLHCQYLGIPIKGDVKYEGVYEWNGVVYDGHEL 938
           KS+++ D +K E+L+RA PRSGRTHQIRLHCQYLGIPI+GDVKYEGV EWN  +YD HEL
Sbjct: 260 KSLVDIDSHKDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHEL 319

Query: 939 H 941
           H
Sbjct: 320 H 320


>ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [Vitis vinifera]
          Length = 348

 Score =  338 bits (866), Expect = 1e-90
 Identities = 182/322 (56%), Positives = 227/322 (70%), Gaps = 15/322 (4%)
 Frame = +3

Query: 21  PSIRLRA---PSISRTSTTVFRSLLMAVQHQCDSQKTHLDKD----PKHLENYPVPLSPP 179
           PS+ LR+   P++  T T   RSL  ++ H   ++  ++D +    P+ L NYP P+SPP
Sbjct: 5   PSLCLRSSLSPNLP-TITAAVRSLGASLPHTTMAE--YIDPNSKDAPQILTNYPKPISPP 61

Query: 180 LPAISKDMEXXXXXXXXXXXXXXXXXXIDVLLEDEWLVALNKPPGVYCETILASVPSLLN 359
           LPAISK +E                   D+L ED+WL+A+NKP GVYCETIL SV  +L+
Sbjct: 62  LPAISKHIEQSRAMSASSRSSLFSLCRSDILFEDQWLMAVNKPQGVYCETILLSVSRMLD 121

Query: 360 DSP--DESRELGTQSKKLEFHLANRLDRDTSGVILITKSHKVAAKLVKAFTDHKVRKTYI 533
           DS   D  R L         HLANRLDRDTSGV++ITKSH+VAAKL+KAF+D KV KTY+
Sbjct: 122 DSDGHDSCRSL---------HLANRLDRDTSGVMVITKSHQVAAKLMKAFSDRKVTKTYL 172

Query: 534 ALCVGQAPKWKKITVKSGHGRSKFGAWRVYAATDVGRILPGGSSVRDMETLFEVLSMNGQ 713
           ALC+G AP W+KIT+KSGHGRSKFGAWRVYAA+DVGR LP   +++DM T FEVLS+NGQ
Sbjct: 173 ALCIGAAPTWEKITIKSGHGRSKFGAWRVYAASDVGRALPNAPAIKDMVTSFEVLSVNGQ 232

Query: 714 ECYKE------SSELDIVVKEKSVIECDGNKVEVLVRAFPRSGRTHQIRLHCQYLGIPIK 875
              KE      + E  +VV+E+SVI+ +  + E+LVRAFPRSGRTHQIRLHCQYLGI I+
Sbjct: 233 GNVKELPESRKADETVLVVEERSVIDSNARQDEILVRAFPRSGRTHQIRLHCQYLGISIR 292

Query: 876 GDVKYEGVYEWNGVVYDGHELH 941
           GDVKYEGV+EW G +YDGHELH
Sbjct: 293 GDVKYEGVHEWKGKIYDGHELH 314


>ref|XP_002318955.1| predicted protein [Populus trichocarpa] gi|222857331|gb|EEE94878.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  325 bits (834), Expect = 7e-87
 Identities = 161/231 (69%), Positives = 186/231 (80%), Gaps = 5/231 (2%)
 Frame = +3

Query: 264 DVLLEDEWLVALNKPPGVYCETILASVPSLLNDSPDESRELGTQSKKLEFHLANRLDRDT 443
           DVL +D+WL+A+NKP GVYCET+L SVP L                    HLANRLDRDT
Sbjct: 16  DVLYQDQWLIAVNKPQGVYCETVLDSVPQL--------------------HLANRLDRDT 55

Query: 444 SGVILITKSHKVAAKLVKAFTDHKVRKTYIALCVGQAPKWKKITVKSGHGRSKFGAWRVY 623
           SGV++ITK HKVA+KLVKAFTDHKVRKTYIALC+G APKW+KIT+KSGHGRSKFGA+RVY
Sbjct: 56  SGVMVITKLHKVASKLVKAFTDHKVRKTYIALCIGSAPKWEKITIKSGHGRSKFGAFRVY 115

Query: 624 AATDVGRILPGGSSVRDMETLFEVLSMNGQECYKESSELD-----IVVKEKSVIECDGNK 788
           AA+DVGR LPGGS+V+DMET FEVLS+NGQ  ++E SE +     +VV+EK+VI+ D  K
Sbjct: 116 AASDVGRSLPGGSTVKDMETSFEVLSINGQGSFREPSEFNSDKNILVVEEKAVIDTDAKK 175

Query: 789 VEVLVRAFPRSGRTHQIRLHCQYLGIPIKGDVKYEGVYEWNGVVYDGHELH 941
            E+LVRAFPRSGRTHQIRLHCQYLGIPI+GDVKYEGV EW G  YDGHELH
Sbjct: 176 DEILVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVCEWKGRTYDGHELH 226