BLASTX nr result

ID: Atractylodes22_contig00035041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00035041
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    60   2e-07
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    55   4e-06
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    55   6e-06
gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncat...    55   6e-06
gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncat...    55   6e-06

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
 Frame = +2

Query: 245 GSGNQGRSQINSDV--NGPNQNRNRGFRSLSRTEWEERRRKGLCFRCGQIFSPAHKCPEG 418
           G G +G  Q   D   +GP   R+R F  LS  E  ER++KGLCF+CG  F P H+CP+ 
Sbjct: 73  GFGPKGEKQAQYDKKKSGP---RDRSFTHLSYNELMERKQKGLCFKCGGPFHPMHQCPDK 129

Query: 419 DLRVLLL 439
            LRVL+L
Sbjct: 130 QLRVLVL 136


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = +2

Query: 242 AGSGNQGRSQINSDVNGPNQNRNRGFRSLSRTEWEERRRKGLCFRCGQIFSPA-HKCPEG 418
           A +G +G +   + V+     + +G RS+   E  ERR KGLCF+CG  + P  HKCPE 
Sbjct: 278 ASTGRKGETDTRTGVS----EKWKGVRSIRNNEMAERRAKGLCFKCGGKYHPTLHKCPER 333

Query: 419 DLRVLLL 439
            LRVL+L
Sbjct: 334 ALRVLIL 340


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/51 (52%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
 Frame = +2

Query: 290  GPNQNRNRGFRSLSRTEWEERRRKGLCFRCGQIFSPA-HKCPEGDLRVLLL 439
            G    R +G RS+   E  ERR KGLCF+CG  + P  HKCPE  LRVL+L
Sbjct: 915  GDRVERWKGVRSIQNGEMAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLIL 965


>gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
 Frame = +2

Query: 239 DAGSGNQGRSQINSDVNGPNQN-----RNRGFRSLSRTEWEERRRKGLCFRCGQIFSPAH 403
           ++G  N+ R   N   N  +       R++  RSLS  E  +RR+KGLCF+CG  + P H
Sbjct: 16  NSGGNNRARGMFNVGQNKTHTINTANWRDKNVRSLSSQEIADRRQKGLCFKCGGPYHPRH 75

Query: 404 KCPEGDLRVLLL 439
           +CP+ +L V++L
Sbjct: 76  QCPDKNLSVMVL 87


>gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
 Frame = +2

Query: 239 DAGSGNQGRSQINSDVNGPNQN-----RNRGFRSLSRTEWEERRRKGLCFRCGQIFSPAH 403
           ++G  N+ R   N   N  +       R++  RSLS  E  +RR+KGLCF+CG  + P H
Sbjct: 16  NSGGNNRAREMFNVGQNKTHTINTANWRDKNVRSLSSQEIADRRQKGLCFKCGGPYHPRH 75

Query: 404 KCPEGDLRVLLL 439
           +CP+ +L V++L
Sbjct: 76  QCPDKNLSVMVL 87


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