BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034991
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...   107   1e-21
gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza...   103   1e-20
gb|AAG46116.1|AC073166_14 putative copia-like retrotransposon po...   103   1e-20
gb|ABB47941.2| retrotransposon protein, putative, unclassified [...   103   1e-20
gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sat...   103   1e-20

>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score =  107 bits (266), Expect = 1e-21
 Identities = 60/128 (46%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   HMTFNPGNLLSSTPCDKSKVIMVGNGAVLPVNFIGHSHLPFSNSSLTLNNILVSNQMVKN 182
           H+T N GNL S+       ++ VGNG++ PV  IGH  L + + S +L N+LV   +VKN
Sbjct: 371 HITSNIGNLQSTFNTSTMPLVTVGNGSLAPVETIGHGTLSYPSRSFSLRNVLVCPAIVKN 430

Query: 183 LIYVRQFTTDNSVSVEFDLSDFSVKDLKTGSFLHRSDSSGDLYPVLPLSIRST-HAKALI 359
           L+ VR+F TDN  ++EFD   FSVKDLKT + L R DSSG LY V P S  S+ HA A  
Sbjct: 431 LVSVRKFVTDNWCTIEFDPFGFSVKDLKTRNKLLRCDSSGPLYSVTPSSYPSSHHALAAT 490

Query: 360 DVSPLTWH 383
                 WH
Sbjct: 491 TSDSFIWH 498


>gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza sativa Japonica Group]
          Length = 1803

 Score =  103 bits (258), Expect = 1e-20
 Identities = 60/128 (46%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   HMTFNPGNLLSSTPCDKSKVIMVGNGAVLPVNFIGHSHLPFSNSSLTLNNILVSNQMVKN 182
           HM+  PG L    P   S  I VGNGA LPV     +H+P S++ L L+N+LVS  ++KN
Sbjct: 377 HMSSTPGILAHPRPLPFSSCITVGNGAKLPVTHTASTHIPTSSTDLHLHNVLVSPPLIKN 436

Query: 183 LIYVRQFTTDNSVSVEFDLSDFSVKDLKTGSFLHRSDSSGDLYPVLPLSIRSTHA-KALI 359
           LI V++ T DN+VS+EFD + FS+KDL+T     R DS GDLY   PL + S HA  A  
Sbjct: 437 LISVKKLTRDNNVSIEFDPTGFSIKDLQTQVVKLRCDSPGDLY---PLRLPSPHALSATS 493

Query: 360 DVSPLTWH 383
             S   WH
Sbjct: 494 SPSVEHWH 501


>gb|AAG46116.1|AC073166_14 putative copia-like retrotransposon polyprotein [Oryza sativa
           Japonica Group]
          Length = 1302

 Score =  103 bits (258), Expect = 1e-20
 Identities = 60/128 (46%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   HMTFNPGNLLSSTPCDKSKVIMVGNGAVLPVNFIGHSHLPFSNSSLTLNNILVSNQMVKN 182
           HM+  PG L    P   S  I VGNGA LPV     +H+P S++ L L+N+LVS  ++KN
Sbjct: 377 HMSSTPGILAHPRPLPFSSCITVGNGAKLPVTHTASTHIPTSSTDLHLHNVLVSPPLIKN 436

Query: 183 LIYVRQFTTDNSVSVEFDLSDFSVKDLKTGSFLHRSDSSGDLYPVLPLSIRSTHA-KALI 359
           LI V++ T DN+VS+EFD + FS+KDL+T     R DS GDLY   PL + S HA  A  
Sbjct: 437 LISVKKLTRDNNVSIEFDPTGFSIKDLQTQVVKLRCDSPGDLY---PLRLPSPHALSATS 493

Query: 360 DVSPLTWH 383
             S   WH
Sbjct: 494 SPSVEHWH 501


>gb|ABB47941.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1414

 Score =  103 bits (258), Expect = 1e-20
 Identities = 60/128 (46%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   HMTFNPGNLLSSTPCDKSKVIMVGNGAVLPVNFIGHSHLPFSNSSLTLNNILVSNQMVKN 182
           HM+  PG L    P   S  I VGNGA LPV     +H+P S++ L L+N+LVS  ++KN
Sbjct: 377 HMSSTPGILAHPRPLPFSSCITVGNGAKLPVTHTASTHIPTSSTDLHLHNVLVSPPLIKN 436

Query: 183 LIYVRQFTTDNSVSVEFDLSDFSVKDLKTGSFLHRSDSSGDLYPVLPLSIRSTHA-KALI 359
           LI V++ T DN+VS+EFD + FS+KDL+T     R DS GDLY   PL + S HA  A  
Sbjct: 437 LISVKKLTRDNNVSIEFDPTGFSIKDLQTQVVKLRCDSPGDLY---PLRLPSPHALSATS 493

Query: 360 DVSPLTWH 383
             S   WH
Sbjct: 494 SPSVEHWH 501


>gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sativa Japonica Group]
          Length = 1417

 Score =  103 bits (258), Expect = 1e-20
 Identities = 60/128 (46%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   HMTFNPGNLLSSTPCDKSKVIMVGNGAVLPVNFIGHSHLPFSNSSLTLNNILVSNQMVKN 182
           HM+  PG L    P   S  I VGNGA LPV     +H+P S++ L L+N+LVS  ++KN
Sbjct: 377 HMSSTPGILAHPRPLPFSSCITVGNGAKLPVTHTASTHIPTSSTDLHLHNVLVSPPLIKN 436

Query: 183 LIYVRQFTTDNSVSVEFDLSDFSVKDLKTGSFLHRSDSSGDLYPVLPLSIRSTHA-KALI 359
           LI V++ T DN+VS+EFD + FS+KDL+T     R DS GDLY   PL + S HA  A  
Sbjct: 437 LISVKKLTRDNNVSIEFDPTGFSIKDLQTQVVKLRCDSPGDLY---PLRLPSPHALSATS 493

Query: 360 DVSPLTWH 383
             S   WH
Sbjct: 494 SPSVEHWH 501