BLASTX nr result

ID: Atractylodes22_contig00034977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034977
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   102   2e-20
emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]   102   2e-20
ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    99   4e-19
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...    99   4e-19
ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17

>ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
           vinifera]
          Length = 416

 Score =  102 bits (255), Expect = 2e-20
 Identities = 48/78 (61%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = -3

Query: 233 RDAVRTSILSSQWRYKWVSLTSLVFDDRCELVSSQNPTIIKNKMAKIIDHVLLLHNGQIH 54
           RDAVR S+LSS+WR+KWV+L  LVFD++C  +SSQ+ T++KNK+  IIDHVLLLH G IH
Sbjct: 26  RDAVRMSVLSSKWRFKWVTLPYLVFDNQCVSISSQDQTLVKNKLVNIIDHVLLLHTGPIH 85

Query: 53  TFKLANLD-VCHSDIDRW 3
            F+L++ D +  SDIDRW
Sbjct: 86  KFRLSHRDFLGGSDIDRW 103


>emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]
          Length = 416

 Score =  102 bits (255), Expect = 2e-20
 Identities = 48/78 (61%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = -3

Query: 233 RDAVRTSILSSQWRYKWVSLTSLVFDDRCELVSSQNPTIIKNKMAKIIDHVLLLHNGQIH 54
           RDAVR S+LSS+WR+KWV+L  LVFD++C  +SSQ+ T++KNK+  IIDHVLLLH G IH
Sbjct: 26  RDAVRMSVLSSKWRFKWVTLPYLVFDNQCVSISSQDQTLVKNKLVNIIDHVLLLHTGPIH 85

Query: 53  TFKLANLD-VCHSDIDRW 3
            F+L++ D +  SDIDRW
Sbjct: 86  KFRLSHRDFLGGSDIDRW 103


>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/78 (61%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
 Frame = -3

Query: 233 RDAVRTSILSSQWRYKWVSLTSLVFDDRCELVSSQNPTIIKNKMAKIIDHVLLLHNGQIH 54
           R+AVRTS+LSS+WRYKW +L  LVFD  C  V+SQ+  IIKNK+ +IIDHVLLLH+G I+
Sbjct: 37  REAVRTSVLSSKWRYKWATLPILVFDTHCVSVASQDHMIIKNKLLRIIDHVLLLHSGPIN 96

Query: 53  TFKLANLDVCH-SDIDRW 3
            FKL++ D+   +DIDRW
Sbjct: 97  KFKLSHRDLIGVTDIDRW 114


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/78 (60%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
 Frame = -3

Query: 233 RDAVRTSILSSQWRYKWVSLTSLVFDDRCELVSSQNPTIIKNKMAKIIDHVLLLHNGQIH 54
           RDAVRTS LS +WRYKW  +  LVFD++C  + SQ+ T+IK+K+  IIDHVLLLHNG I 
Sbjct: 36  RDAVRTSALSRKWRYKWAKIPHLVFDNKCVSIPSQDQTLIKDKLVNIIDHVLLLHNGPIQ 95

Query: 53  TFKLANLDVCH-SDIDRW 3
            FKL++ D+   SDIDRW
Sbjct: 96  KFKLSHRDLLGVSDIDRW 113


>ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|222844192|gb|EEE81739.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
 Frame = -3

Query: 233 RDAVRTSILSSQWRYKWVSLTSLVFDDRCELVSSQNPTIIKNKMAKIIDHVLLLHNGQIH 54
           RDAVRTS L  +WRYKW  +  +VFD +   +SSQ+ T IKNK+  IIDH+LLLHNG I+
Sbjct: 115 RDAVRTSALKRKWRYKWSQIPHIVFDSQGISISSQDQTTIKNKLVNIIDHILLLHNGPIY 174

Query: 53  TFKLANLD-VCHSDIDRW 3
            FKL++ D +  SDIDRW
Sbjct: 175 KFKLSHCDLLAVSDIDRW 192


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