BLASTX nr result

ID: Atractylodes22_contig00034953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034953
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32793.1| Putative non-LTR retroelement reverse transcripta...    62   5e-10
gb|ABD32346.1| H+-transporting two-sector ATPase, alpha/beta sub...    58   3e-09
ref|XP_003611652.1| Indole-3-acetic acid-amido synthetase GH3.3 ...    58   6e-09
ref|XP_003604787.1| GDP-mannose transporter [Medicago truncatula...    55   1e-07
ref|XP_003535019.1| PREDICTED: uncharacterized protein LOC100795...    54   6e-07

>gb|ABD32793.1| Putative non-LTR retroelement reverse transcriptase, related
           [Medicago truncatula]
          Length = 373

 Score = 62.0 bits (149), Expect(2) = 5e-10
 Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
 Frame = +1

Query: 61  WLKIVPIKVNVFIWRLRLARLSVRDYL-DRLGLDLHTTICPRCDNGVETLDHCFVGCSSI 237
           WLK VP+KVN+F+WRL L RL+ +D L  R  L+     C       E +DH F  C   
Sbjct: 204 WLKAVPLKVNIFVWRLFLNRLATKDNLRKRNVLEATYVSCGALCGKEEEMDHLFFQCDYY 263

Query: 238 LQVWVRIRRW*GISSSFSGTL 300
            Q+W+ I  W G  + F G L
Sbjct: 264 GQLWLLISNWLGFVTVFHGNL 284



 Score = 26.6 bits (57), Expect(2) = 5e-10
 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +2

Query: 362 IVWTS-LYLLWKNRNMLVFSN 421
           I+W S L+ +WK+RN  +F N
Sbjct: 307 IIWISVLFTIWKDRNRRIFQN 327


>gb|ABD32346.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region, related [Medicago truncatula]
          Length = 248

 Score = 58.2 bits (139), Expect(2) = 3e-09
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
 Frame = +1

Query: 61  WLKIVPIKVNVFIWRLRLARLSVRDYL-DRLGLDLHTTICPRCDNGVETLDHCFVGCSSI 237
           WLK VP+KVN+F+WR  L RL+ +D L  R  L+     C       E  DH F  C+  
Sbjct: 82  WLKAVPLKVNIFVWRFFLNRLATKDNLRKRNVLEATNVSCGALCGKEEKRDHLFFQCAYY 141

Query: 238 LQVWVRIRRW*GISSSFSGTL 300
            ++W+ +  W G  + F+G L
Sbjct: 142 GRLWLMLSDWLGFVTVFNGNL 162



 Score = 28.1 bits (61), Expect(2) = 3e-09
 Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +2

Query: 362 IVWTS-LYLLWKNRNMLVFSN 421
           I+W S LY +WK+RN  +F N
Sbjct: 185 IIWISVLYTIWKDRNRRIFQN 205


>ref|XP_003611652.1| Indole-3-acetic acid-amido synthetase GH3.3 [Medicago truncatula]
           gi|355512987|gb|AES94610.1| Indole-3-acetic acid-amido
           synthetase GH3.3 [Medicago truncatula]
          Length = 818

 Score = 57.8 bits (138), Expect(2) = 6e-09
 Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = +1

Query: 61  WLKIVPIKVNVFIWRLRLARLSVRDYL-DRLGLDLHTTICPRCDNGVETLDHCFVGCSSI 237
           WLK VP+KVN+F+WRL L RL+ +D L  R  L+     C       E  DH F  C   
Sbjct: 649 WLKAVPLKVNIFVWRLFLNRLATKDNLRKRNVLEATNVFCGALCGKEEERDHLFFRCDYY 708

Query: 238 LQVWVRIRRW*GISSSFSGTL 300
            ++W+ +  W G  +  +G L
Sbjct: 709 GRLWLMLSDWLGFVTVLNGNL 729



 Score = 27.3 bits (59), Expect(2) = 6e-09
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +2

Query: 359 NIVWTS-LYLLWKNRNMLVFSNLSTPME 439
           +I+W S L+ +WK+RN  +F N    +E
Sbjct: 751 SIIWISVLFTIWKDRNRRIFQNQIVHLE 778


>ref|XP_003604787.1| GDP-mannose transporter [Medicago truncatula]
           gi|355505842|gb|AES86984.1| GDP-mannose transporter
           [Medicago truncatula]
          Length = 650

 Score = 55.1 bits (131), Expect(2) = 1e-07
 Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
 Frame = +1

Query: 10  VFEKAFIQTQH----QPIPTSWLKIVPIKVNVFIWRLRLARLSVRDYLDRLGLDLHTTIC 177
           +F + F  T H      +   W K +P KV+V +WRL   RL  +D L   G  L T + 
Sbjct: 27  IFYRYFTSTSHISDRSLVDDVWHKHIPSKVSVLVWRLLRNRLPTKDNLVHRGFLLSTDVA 86

Query: 178 PRCDNG---VETLDHCFVGCSSILQVWVRIRRW*GISSSFSGTL 300
             C +G   +E+  H F+ C+    +W  +R W GISS   G L
Sbjct: 87  --CVSGCVDIESATHLFLHCNVFGSLWSLVRNWLGISSVPFGEL 128



 Score = 25.4 bits (54), Expect(2) = 1e-07
 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 338 RYKMLPSNIVW-TSLYLLWKNRNMLVFSNLST 430
           R   L   I+W  +++++WK RN  +F N  T
Sbjct: 143 RVSHLYFRIIWFATIWVIWKKRNNRIFKNSVT 174


>ref|XP_003535019.1| PREDICTED: uncharacterized protein LOC100795609 [Glycine max]
          Length = 525

 Score = 54.3 bits (129), Expect(2) = 6e-07
 Identities = 28/94 (29%), Positives = 41/94 (43%)
 Frame = +1

Query: 7   MVFEKAFIQTQHQPIPTSWLKIVPIKVNVFIWRLRLARLSVRDYLDRLGLDLHTTICPRC 186
           ++ E+A   +Q +     W   VP +  VF WRL   RL  R  L R  + L  ++CP C
Sbjct: 337 LIGEEATDSSQEECFEKLWRIKVPARFLVFAWRLLRDRLPTRKNLQRRQIQLTDSLCPLC 396

Query: 187 DNGVETLDHCFVGCSSILQVWVRIRRW*GISSSF 288
               E   H F  CS +  +W     W  +  +F
Sbjct: 397 RTQQEDASHLFFHCSKVQPIWWETMSWLQVKGAF 430



 Score = 23.9 bits (50), Expect(2) = 6e-07
 Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = +2

Query: 368 WTSL-YLLWKNRNMLVFSN 421
           W +L + +WK RN +VFSN
Sbjct: 458 WLALTWSIWKLRNSIVFSN 476


Top