BLASTX nr result

ID: Atractylodes22_contig00034904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034904
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis...    72   8e-11
emb|CBI40164.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis...    68   1e-09
ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine...    59   5e-07
ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine...    58   2e-06

>ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449511918|ref|XP_004164088.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 391

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 5/185 (2%)
 Frame = -2

Query: 578 QPSRMVGSSGGLFCVCXXXXXXXXXXXNRGKRMAVLWNPTIRKSIAIDVPKFEKPHDVPK 399
           Q  ++VGSS GL C+                +    WNP+I++ +A+  P      D+  
Sbjct: 101 QSFKLVGSSNGLLCLLG--------------QNIFFWNPSIQRFLALPWPS-----DIFT 141

Query: 398 IE-QPYD-VLGFGVCPVNSDPKIVKITHLRLGWNMKNKDSMPLKVEVYTLSTGEWRTVPC 225
           +   PY   LGFG     +D K+V++ ++  G  + + + +P +VE+Y LSTG WR +  
Sbjct: 142 VYGSPYKYALGFGFDSRANDFKLVRLVYIEGGPPVYDYE-LPPRVELYQLSTGSWRQITD 200

Query: 224 NLP-RQSIRVEWNQVFIDRFIYWLAQEKIAINGIFRTFFR--IVSFHMTTDEFREVYLPD 54
           + P  + ++ +W Q+F++  ++W+A  +       R  FR  I+ FHM  + F  + LPD
Sbjct: 201 SAPCYEILKSQWTQIFMNEAVHWIAFIR------SRRGFRCVILRFHMDGEYFSTIPLPD 254

Query: 53  SLAHQ 39
            L ++
Sbjct: 255 CLVNE 259


>emb|CBI40164.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 5/177 (2%)
 Frame = -2

Query: 569 RMVGSSGGLFCVCXXXXXXXXXXXNRGKRMAV---LWNPTIRKSIAIDVPKFEKPHDVPK 399
           ++VGSS GL C+             +G  +++   LWNP IR+   +  PK+     +  
Sbjct: 111 QIVGSSNGLICLTESNF--------KGSYLSLNLFLWNPAIREFQTL--PKYH----INN 156

Query: 398 IEQPYDVLGFGVC--PVNSDPKIVKITHLRLGWNMKNKDSMPLKVEVYTLSTGEWRTVPC 225
              P  V+G G    PV +D K+V+I +      M+NK S   + +VY+L TG WR V  
Sbjct: 157 FTSPLMVVGLGFAFHPVINDYKVVRIVYF-----MRNKTS---EADVYSLRTGSWRKVDA 208

Query: 224 NLPRQSIRVEWNQVFIDRFIYWLAQEKIAINGIFRTFFRIVSFHMTTDEFREVYLPD 54
           N+    I    ++ FI+  ++WLA +K   N +  T   I+SF M  D F+E+ LPD
Sbjct: 209 NICCY-IHSNVSRTFINGALHWLAGKK---NEMDNTDNLILSFDMAKDVFKEIMLPD 261


>ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449531147|ref|XP_004172549.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 379

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 1/186 (0%)
 Frame = -2

Query: 569 RMVGSSGGLFCVCXXXXXXXXXXXNRGKRMAVLWNPTIRKSIAIDVPKFEKPHDVPKIEQ 390
           ++VG S GL C                    +LWNP+I++   +DVP+         +  
Sbjct: 100 KIVGVSNGLVCFLGLDL--------------LLWNPSIQR--VVDVPRTSDTVTTYGVPD 143

Query: 389 PYDVLGFGVCPVNSDPKIVKITHLRLGWNMKNKDSMPLKVEVYTLSTGEWRTVPCNLPR- 213
            Y  LGFG      D K+V++ +         K S   KVE+Y + TG WR +    PR 
Sbjct: 144 FY-ALGFGFDSCADDHKVVRLLYFADKVPFSYKRSP--KVELYEVGTGSWRAINNKAPRC 200

Query: 212 QSIRVEWNQVFIDRFIYWLAQEKIAINGIFRTFFRIVSFHMTTDEFREVYLPDSLAHQSY 33
           + +R  W Q F++  ++W+A  +I     +R F  I+ F +  + F  + LPD LA+ S 
Sbjct: 201 EIVRSGWTQAFVNGAVHWIAYREIGTG--YRCF--ILRFDIVKECFSIITLPDCLANSSP 256

Query: 32  LQMTIS 15
             + ++
Sbjct: 257 YDLKVT 262


>ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 382

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 48/188 (25%), Positives = 87/188 (46%)
 Frame = -2

Query: 569 RMVGSSGGLFCVCXXXXXXXXXXXNRGKRMAVLWNPTIRKSIAIDVPKFEKPHDVPKIEQ 390
           +++GSS GL C+                    LWNP +RK   +   +F +P       +
Sbjct: 88  KVLGSSNGLLCISNVADDI------------ALWNPFLRKHRILPSDRFHRPESSLFAAR 135

Query: 389 PYDVLGFGVCPVNSDPKIVKITHLRLGWNMKNKDSMPLKVEVYTLSTGEWRTVPCNLPRQ 210
            Y   GFG  P ++D K++ IT+  +  + +  DS   +V++YTL +  W+ +P ++P  
Sbjct: 136 VY---GFGHHPPSNDYKLLSITYF-VDLHKRTFDS---QVQLYTLKSDSWKNLP-SMPYA 187

Query: 209 SIRVEWNQVFIDRFIYWLAQEKIAINGIFRTFFRIVSFHMTTDEFREVYLPDSLAHQSYL 30
                   VF+   ++WL   K+  +        IV+F +T++ F EV LP ++     +
Sbjct: 188 LCCARTMGVFVSGSLHWLVTRKLQPD----EPDLIVAFDLTSETFCEVPLPATVNGNFDM 243

Query: 29  QMTISKVC 6
           Q+ +   C
Sbjct: 244 QVALLGGC 251


>ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 385

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 48/188 (25%), Positives = 84/188 (44%)
 Frame = -2

Query: 569 RMVGSSGGLFCVCXXXXXXXXXXXNRGKRMAVLWNPTIRKSIAIDVPKFEKPHDVPKIEQ 390
           +++GSS GL C+                    LWNP +RK   +   +F +P       +
Sbjct: 88  KVLGSSNGLLCISNVADDI------------ALWNPFLRKHRILPADRFHRPQSSLFAAR 135

Query: 389 PYDVLGFGVCPVNSDPKIVKITHLRLGWNMKNKDSMPLKVEVYTLSTGEWRTVPCNLPRQ 210
            Y   GFG    ++D K++ IT+  +    +  DS   +V++YTL +  W+ +P ++P  
Sbjct: 136 VY---GFGHHSPSNDYKLLSITYF-VDLQKRTFDS---QVQLYTLKSDSWKNLP-SMPYA 187

Query: 209 SIRVEWNQVFIDRFIYWLAQEKIAINGIFRTFFRIVSFHMTTDEFREVYLPDSLAHQSYL 30
                   VF+   ++WL   K+  +        IVSF +T + F EV LP ++     +
Sbjct: 188 LCCARTMGVFVSGSLHWLVTRKLQPH----EPDLIVSFDLTRETFHEVPLPVTVNGDFDM 243

Query: 29  QMTISKVC 6
           Q+ +   C
Sbjct: 244 QVALLGGC 251


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