BLASTX nr result

ID: Atractylodes22_contig00034903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034903
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530844.1| zinc finger protein, putative [Ricinus commu...   169   1e-39
ref|XP_002278642.1| PREDICTED: dof zinc finger protein DOF3.6 [V...   165   2e-38
emb|CAN79495.1| hypothetical protein VITISV_020749 [Vitis vinifera]   162   1e-37
emb|CBI31672.3| unnamed protein product [Vitis vinifera]              160   4e-37
ref|XP_002332583.1| f-box family protein [Populus trichocarpa] g...   147   3e-33

>ref|XP_002530844.1| zinc finger protein, putative [Ricinus communis]
           gi|223529568|gb|EEF31518.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 338

 Score =  169 bits (427), Expect = 1e-39
 Identities = 109/269 (40%), Positives = 125/269 (46%), Gaps = 53/269 (19%)
 Frame = +2

Query: 5   KLPQPETAMKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVXXXXXX 184
           K+PQPETA+KCPRCESTNTKFCYFNNYSL+QPRHFCKTCRRYWTRGGALRNVPV      
Sbjct: 72  KVPQPETALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPV----GG 127

Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNCCTTDILGHLPHNTRPSQFPILPPLHHYX 364
                                         N C  DI+GH+P    P   PILPPLHH  
Sbjct: 128 GCRRNKRSKGSNRSKSPSKAGSSSSSGLVSNSCINDIIGHMP--PPPPHLPILPPLHHLT 185

Query: 365 XXXXXXXXXXXXXT------------------------------DLIHLGHDSNYPSSRF 454
                                                        ++  G    +   + 
Sbjct: 186 DFNSTDIGLNFSGIQPQVVAPAGGGAGMEFQIGSTSSGGGGGVGSILSSGLVDQWRLQQA 245

Query: 455 AQFPF-----AGMY-----GEGPSNYGGQV-----------GGILKMEEN--HHQGLNLS 565
            QFPF      G+Y     G GP NY GQ+              +KMEEN  HHQGLNLS
Sbjct: 246 QQFPFLPNLEPGLYHFEGEGAGPPNYVGQLRSKPLETGVTQRASVKMEENNHHHQGLNLS 305

Query: 566 RNFLGIPGNEQFLGTSNVAWSTTDLSGFN 652
           +NF    GN+QF G +N AW  TD+ GFN
Sbjct: 306 KNFFS--GNDQFWGGNNNAW--TDIPGFN 330


>ref|XP_002278642.1| PREDICTED: dof zinc finger protein DOF3.6 [Vitis vinifera]
          Length = 338

 Score =  165 bits (417), Expect = 2e-38
 Identities = 111/270 (41%), Positives = 130/270 (48%), Gaps = 54/270 (20%)
 Frame = +2

Query: 5   KLPQPETAMKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVXXXXXX 184
           KLPQPETA+KCPRCESTNTKFCYFNNYSLSQPRHFCK CRRYWTRGGALRNVPV      
Sbjct: 68  KLPQPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPV-GGGCR 126

Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNCCTTDILGHLPHNTRPSQFPILPPLHHY- 361
                                         N CT+D++GHLP    P Q   LPPLHH  
Sbjct: 127 RNKRSKGNRSKSPVTGERQGGSSSASAVPSNSCTSDMIGHLPPPPPPPQLSFLPPLHHLA 186

Query: 362 -------------XXXXXXXXXXXXXXTD--------------LIHLGHDSNYPSSRFAQ 460
                                      TD              ++  G   ++   +  Q
Sbjct: 187 DYGAGDIGLNFGGIQPPVAVSGGGNSGTDIEFPIGSCSGGGGPILSGGLAEHWRLQQVQQ 246

Query: 461 FPF-------AGMY---GEG--PSNYGGQVGGI--------------LKMEENHHQGLNL 562
           FPF       +G+Y   GEG  P +Y G  G +              +K+EEN  QGLNL
Sbjct: 247 FPFLAGLEPPSGLYSFEGEGTEPPSYLGGSGHLRAKALDSGVTQMTAVKIEEN--QGLNL 304

Query: 563 SRNFLGIPGNEQFLGTSNVAWSTTDLSGFN 652
           SRNFLG+PGN+Q+   S   W+  DLSGFN
Sbjct: 305 SRNFLGLPGNDQY--WSGNTWN--DLSGFN 330


>emb|CAN79495.1| hypothetical protein VITISV_020749 [Vitis vinifera]
          Length = 338

 Score =  162 bits (409), Expect = 1e-37
 Identities = 111/270 (41%), Positives = 129/270 (47%), Gaps = 54/270 (20%)
 Frame = +2

Query: 5   KLPQPETAMKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVXXXXXX 184
           KLPQPETA+KCPRCESTNTKFCYFNNYSLSQPRHFCK CRRYWTRGGALRNVPV      
Sbjct: 68  KLPQPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPV-GGGCR 126

Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNCCTTDILGHLPHNTRPSQFPILPPLHH-- 358
                                         N CT+D++GHLP    P Q   LP LHH  
Sbjct: 127 RNKRSKGNRSKSPVTGERQGGSSSASAVPSNSCTSDMIGHLPPPPPPPQLSFLPXLHHLA 186

Query: 359 -YXXXXXXXXXXXXXXTDLI----HLGHDSNYP---------------------SSRFAQ 460
            Y                 +    + G D  +P                       +  Q
Sbjct: 187 DYGAGDIGLNFGGIQPPVAVSGGGNSGTDIEFPIGSCSGGGGPILSGGLAEQWRLQQVQQ 246

Query: 461 FPF-------AGMY---GEG--PSNYGGQVGGI--------------LKMEENHHQGLNL 562
           FPF       +G+Y   GEG  P +Y G  G +              +K+EEN  QGLNL
Sbjct: 247 FPFLAGLEPPSGLYSFEGEGTEPPSYLGGSGHLRAKALDSGVTQMTAVKIEEN--QGLNL 304

Query: 563 SRNFLGIPGNEQFLGTSNVAWSTTDLSGFN 652
           SRNFLG+PGN+Q+   S   W+  DLSGFN
Sbjct: 305 SRNFLGLPGNDQY--WSGNTWN--DLSGFN 330


>emb|CBI31672.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  160 bits (405), Expect = 4e-37
 Identities = 109/268 (40%), Positives = 128/268 (47%), Gaps = 54/268 (20%)
 Frame = +2

Query: 5   KLPQPETAMKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVXXXXXX 184
           KLPQPETA+KCPRCESTNTKFCYFNNYSLSQPRHFCK CRRYWTRGGALRNVPV      
Sbjct: 68  KLPQPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPV-GGGCR 126

Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNCCTTDILGHLPHNTRPSQFPILPPLHHY- 361
                                         N CT+D++GHLP    P Q   LPPLHH  
Sbjct: 127 RNKRSKGNRSKSPVTGERQGGSSSASAVPSNSCTSDMIGHLPPPPPPPQLSFLPPLHHLA 186

Query: 362 -------------XXXXXXXXXXXXXXTD--------------LIHLGHDSNYPSSRFAQ 460
                                      TD              ++  G   ++   +  Q
Sbjct: 187 DYGAGDIGLNFGGIQPPVAVSGGGNSGTDIEFPIGSCSGGGGPILSGGLAEHWRLQQVQQ 246

Query: 461 FPF-------AGMY---GEG--PSNYGGQVGGI--------------LKMEENHHQGLNL 562
           FPF       +G+Y   GEG  P +Y G  G +              +K+EEN  QGLNL
Sbjct: 247 FPFLAGLEPPSGLYSFEGEGTEPPSYLGGSGHLRAKALDSGVTQMTAVKIEEN--QGLNL 304

Query: 563 SRNFLGIPGNEQFLGTSNVAWSTTDLSG 646
           SRNFLG+PGN+Q+   S   W+  DLSG
Sbjct: 305 SRNFLGLPGNDQY--WSGNTWN--DLSG 328


>ref|XP_002332583.1| f-box family protein [Populus trichocarpa]
           gi|222832921|gb|EEE71398.1| f-box family protein
           [Populus trichocarpa]
          Length = 337

 Score =  147 bits (371), Expect = 3e-33
 Identities = 109/273 (39%), Positives = 126/273 (46%), Gaps = 58/273 (21%)
 Frame = +2

Query: 5   KLPQPETAMKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVXXXXXX 184
           K+P PE A+KCPRCESTNTKFCYFNNYSL+QPRHFCKTCRRYWTRGGALRNVPV      
Sbjct: 68  KIPLPEMALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRR 127

Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNCCTTDILGHLPHNTRPSQFPILPPLHHYX 364
                                         N  TTDI G++   T P   PI PPL H+ 
Sbjct: 128 NKRSKGSGRSKSPVKAGSSSSGGLSS----NGGTTDITGNM--TTPPPLLPIFPPL-HHL 180

Query: 365 XXXXXXXXXXXXXTDLIHLGHDS-----------NYPSS--------------------- 448
                          L  +G  +           N  SS                     
Sbjct: 181 GDYNSPDIGLNFGGILPSVGATAGGGGGVEFQMENSTSSNSVGGSVLSSGLVEQWRLQQV 240

Query: 449 --RFAQFPF-------AGMY-----GEGPSNYGGQVGG------------ILKMEENHHQ 550
             +  Q+PF       +G+Y     G GPSNY GQ+               +KME N  Q
Sbjct: 241 QHQVQQYPFLSNLEPSSGLYSFEGGGIGPSNYAGQIRSRPLDSTGVSQLASVKMEGN--Q 298

Query: 551 GLNLSRNFLGIPGNEQFLGTSNVAWSTTDLSGF 649
           GLNLSRNFLGI GN+Q+ G +N AW  TDL GF
Sbjct: 299 GLNLSRNFLGISGNDQYWGGNN-AW--TDLPGF 328


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