BLASTX nr result
ID: Atractylodes22_contig00034860
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00034860
(599 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas... 142 5e-59
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [... 132 5e-56
emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera] 122 9e-56
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ... 127 3e-55
emb|CAN75225.1| hypothetical protein VITISV_035856 [Vitis vinifera] 121 4e-55
>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 1297
Score = 142 bits (359), Expect(2) = 5e-59
Identities = 67/103 (65%), Positives = 88/103 (85%)
Frame = +3
Query: 3 HLHKDEIRRQVLEMLNTRILRVSQSAYSSLVILVKKKDSTWQLCIDYKALN*ATIPDKYP 182
H HK+EI +QV EML I+R S S++SS VILVK+KD++W++CIDY+ALN AT+PDK+P
Sbjct: 392 HHHKNEIEKQVREMLQAGIIRHSTSSFSSPVILVKEKDNSWRMCIDYRALNKATVPDKFP 451
Query: 183 IPVVEELLDELHGPQYFSEIDLKSGFYQVRVCECDTEKTAFRT 311
IPV+EELLDELHG +++S++DLKSG++QVRV E D KTAFRT
Sbjct: 452 IPVIEELLDELHGARFYSKLDLKSGYHQVRVKEEDIHKTAFRT 494
Score = 110 bits (276), Expect(2) = 5e-59
Identities = 53/91 (58%), Positives = 63/91 (69%)
Frame = +1
Query: 310 HNGHYDFLVMPFELTNAPTTFQALMNEVFRPLLRKRVLVFFDDILVYSPSWDDHXXXXXX 489
H HY++LVMPF L NAP+TFQ+LMN+VFR LLRK VLVFFDDILVYS W H
Sbjct: 495 HEDHYEYLVMPFGLMNAPSTFQSLMNDVFRLLLRKFVLVFFDDILVYSQDWKTHMEHVEE 554
Query: 490 XXXXXXDHQLVVNHKKSSFGRQSIEYLGHII 582
H LV N KK FG++++EYLGH+I
Sbjct: 555 VLRIMQTHGLVANKKKCYFGQETVEYLGHLI 585
>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1661
Score = 132 bits (333), Expect(2) = 5e-56
Identities = 64/100 (64%), Positives = 80/100 (80%)
Frame = +3
Query: 12 KDEIRRQVLEMLNTRILRVSQSAYSSLVILVKKKDSTWQLCIDYKALN*ATIPDKYPIPV 191
K+EI + V EMLN +I+R S S YSS V+LVKKKD W+ C+DY+ALN ATIPDKYPIPV
Sbjct: 728 KNEIEKLVREMLNAQIIRPSVSPYSSPVLLVKKKDGGWRFCVDYRALNEATIPDKYPIPV 787
Query: 192 VEELLDELHGPQYFSEIDLKSGFYQVRVCECDTEKTAFRT 311
+EELLDEL G FS++DLKSG++Q+R+ D EKTAF+T
Sbjct: 788 IEELLDELKGATVFSKLDLKSGYFQIRMKLSDVEKTAFKT 827
Score = 110 bits (276), Expect(2) = 5e-56
Identities = 54/91 (59%), Positives = 61/91 (67%)
Frame = +1
Query: 310 HNGHYDFLVMPFELTNAPTTFQALMNEVFRPLLRKRVLVFFDDILVYSPSWDDHXXXXXX 489
H GHY+FLVMPF LTNAP+TFQ++MN++FRP LRK VLVFFDDILVYSP H
Sbjct: 828 HEGHYEFLVMPFGLTNAPSTFQSVMNDLFRPYLRKFVLVFFDDILVYSPDMKTHLKHLET 887
Query: 490 XXXXXXDHQLVVNHKKSSFGRQSIEYLGHII 582
HQ N KK +FG I YLGHII
Sbjct: 888 VLQLLHLHQFYANFKKCTFGSTRISYLGHII 918
>emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera]
Length = 1308
Score = 122 bits (307), Expect(2) = 9e-56
Identities = 55/103 (53%), Positives = 78/103 (75%)
Frame = +3
Query: 3 HLHKDEIRRQVLEMLNTRILRVSQSAYSSLVILVKKKDSTWQLCIDYKALN*ATIPDKYP 182
+ K EI QV +MLN ++R S + +SS V+LVKKKD TW+ C DY+ALN AT+ D++P
Sbjct: 434 YFQKTEIENQVQDMLNAGLIRPSTNPFSSPVLLVKKKDGTWRFCTDYRALNAATVKDRFP 493
Query: 183 IPVVEELLDELHGPQYFSEIDLKSGFYQVRVCECDTEKTAFRT 311
IP V+++LDELHG +F+++DLK+G++Q+RV D KTAFRT
Sbjct: 494 IPTVDDMLDELHGAAFFTKLDLKAGYHQIRVSTPDIPKTAFRT 536
Score = 120 bits (300), Expect(2) = 9e-56
Identities = 53/91 (58%), Positives = 66/91 (72%)
Frame = +1
Query: 310 HNGHYDFLVMPFELTNAPTTFQALMNEVFRPLLRKRVLVFFDDILVYSPSWDDHXXXXXX 489
HNGHY++LVMPF L NAP+TFQA+MN +FRP LRK +LVFFD+IL+YSP+W+ H
Sbjct: 537 HNGHYEYLVMPFGLCNAPSTFQAIMNSIFRPYLRKFILVFFDBILIYSPTWEQHLEHVQX 596
Query: 490 XXXXXXDHQLVVNHKKSSFGRQSIEYLGHII 582
HQ V K +FG+Q +EYLGHII
Sbjct: 597 TLAVLRQHQFYVKXSKXAFGKQELEYLGHII 627
>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
Length = 1631
Score = 127 bits (318), Expect(2) = 3e-55
Identities = 60/100 (60%), Positives = 78/100 (78%)
Frame = +3
Query: 12 KDEIRRQVLEMLNTRILRVSQSAYSSLVILVKKKDSTWQLCIDYKALN*ATIPDKYPIPV 191
KDEI R + EML I++ S S +SS VILVKKKD +W+ C+DY+ALN T+PDKYPIPV
Sbjct: 704 KDEIERLIKEMLAAGIIQPSTSPFSSPVILVKKKDGSWRFCVDYRALNKETVPDKYPIPV 763
Query: 192 VEELLDELHGPQYFSEIDLKSGFYQVRVCECDTEKTAFRT 311
++ELLDELHG FS++DL++G++Q+ V DT KTAFRT
Sbjct: 764 IDELLDELHGATVFSKLDLRAGYHQILVRPEDTHKTAFRT 803
Score = 114 bits (284), Expect(2) = 3e-55
Identities = 54/94 (57%), Positives = 64/94 (68%)
Frame = +1
Query: 310 HNGHYDFLVMPFELTNAPTTFQALMNEVFRPLLRKRVLVFFDDILVYSPSWDDHXXXXXX 489
H GHY+FLVMPF LTNAP TFQ+LMNEVFRP LR+ VLVF DDIL+YS S ++H
Sbjct: 804 HEGHYEFLVMPFGLTNAPATFQSLMNEVFRPFLRRFVLVFLDDILIYSRSDEEHVGHLEM 863
Query: 490 XXXXXXDHQLVVNHKKSSFGRQSIEYLGHIIEIG 591
H L VN KK FG++ + YLGH+I G
Sbjct: 864 VLGMLAQHALFVNKKKCEFGKREVAYLGHVISEG 897
>emb|CAN75225.1| hypothetical protein VITISV_035856 [Vitis vinifera]
Length = 793
Score = 121 bits (304), Expect(2) = 4e-55
Identities = 56/103 (54%), Positives = 77/103 (74%)
Frame = +3
Query: 3 HLHKDEIRRQVLEMLNTRILRVSQSAYSSLVILVKKKDSTWQLCIDYKALN*ATIPDKYP 182
+ K EI +QV +ML ++R S S +SS V+LVKKKD TW+ C DY+ALN TI D++P
Sbjct: 512 YFQKAEIEKQVRDMLQLGLIRASTSPFSSPVLLVKKKDGTWRFCTDYRALNAVTIKDRFP 571
Query: 183 IPVVEELLDELHGPQYFSEIDLKSGFYQVRVCECDTEKTAFRT 311
IP V+++LDELHG YF+++DL++G++QVRV D KTAFRT
Sbjct: 572 IPTVDDMLDELHGATYFTKLDLRAGYHQVRVHPPDISKTAFRT 614
Score = 119 bits (297), Expect(2) = 4e-55
Identities = 53/91 (58%), Positives = 66/91 (72%)
Frame = +1
Query: 310 HNGHYDFLVMPFELTNAPTTFQALMNEVFRPLLRKRVLVFFDDILVYSPSWDDHXXXXXX 489
HNGHY++LVMPF L+NAP+TFQA+MN +FRP LRK VLVFFDDIL+YSP+W+ H
Sbjct: 615 HNGHYEYLVMPFGLSNAPSTFQAIMNSIFRPYLRKFVLVFFDDILIYSPNWNMHIEHVKQ 674
Query: 490 XXXXXXDHQLVVNHKKSSFGRQSIEYLGHII 582
HQ V K +FG+Q +EYLGHI+
Sbjct: 675 AFEILRQHQFFVKISKCAFGQQELEYLGHIV 705