BLASTX nr result

ID: Atractylodes22_contig00034844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034844
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312130.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_002524258.1| Rop guanine nucleotide exchange factor, puta...   111   6e-23
ref|XP_002277071.2| PREDICTED: rop guanine nucleotide exchange f...   109   3e-22
emb|CBI31584.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_002315189.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22

>ref|XP_002312130.1| predicted protein [Populus trichocarpa] gi|222851950|gb|EEE89497.1|
           predicted protein [Populus trichocarpa]
          Length = 466

 Score =  114 bits (284), Expect = 1e-23
 Identities = 59/102 (57%), Positives = 76/102 (74%), Gaps = 9/102 (8%)
 Frame = -1

Query: 537 LLYVDDLTRQADNLSS--TADVTNHKRVTIP-CIPSSGTPYKSAFATPKFSPGPLVPPAT 367
           L+YVDDLT+++DNLSS  T  V +H++V+ P  +P SGTPYK+ F+TP FSP PL+ PA 
Sbjct: 361 LVYVDDLTKRSDNLSSVSTVAVISHRKVSNPFSVPVSGTPYKTTFSTPSFSPVPLISPAR 420

Query: 366 GDRTPSLN------GNGNKPPRRGFGVKRALTSYLGGETKAK 259
           G+RTP L+       N NKPPRRGFGVKRALT+YL  ++K K
Sbjct: 421 GERTPFLHSTTSSKSNNNKPPRRGFGVKRALTNYLAVDSKPK 462


>ref|XP_002524258.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
           gi|223536535|gb|EEF38182.1| Rop guanine nucleotide
           exchange factor, putative [Ricinus communis]
          Length = 590

 Score =  111 bits (278), Expect = 6e-23
 Identities = 58/102 (56%), Positives = 71/102 (69%), Gaps = 9/102 (8%)
 Frame = -1

Query: 537 LLYVDDLTRQADNLS-STADVTNHKRVTIP-CIPSSGTPYKSAFATPKFSPGPLVPPATG 364
           LLYVDDLT+ +D L  ST  V  HK+VTIP  +P SGTPY++ F+TP FSP PL+ PA G
Sbjct: 449 LLYVDDLTKHSDKLQVSTVSVIAHKKVTIPYSVPVSGTPYRTTFSTPSFSPAPLISPARG 508

Query: 363 DRTPSL-------NGNGNKPPRRGFGVKRALTSYLGGETKAK 259
           +RTP L         N NKP RRGFGVKR LT+YLG ++K +
Sbjct: 509 ERTPFLPNAATAATNNSNKPHRRGFGVKRVLTNYLGVDSKPR 550


>ref|XP_002277071.2| PREDICTED: rop guanine nucleotide exchange factor 1 [Vitis
           vinifera]
          Length = 571

 Score =  109 bits (272), Expect = 3e-22
 Identities = 66/131 (50%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
 Frame = -1

Query: 537 LLYVDDLTRQADNLSS--TADVTNHKRVTIP-CIPSSGTPYKSAFATPKFSPGPLVPPAT 367
           LLYVDDL +Q+D  SS  T  V  HKRV+IP  +P S TP K+A  T   SP PL+ PA 
Sbjct: 434 LLYVDDLNKQSDKHSSVPTVSVIAHKRVSIPYSVPVSSTPQKTALTTLSRSPAPLISPAR 493

Query: 366 GDRTPSLNGNGNKPPRRGFGVKRALTSYLGGETKAKSNCQLLEGPGCLSTRNSDMPPARS 187
           G+RTP L+   NKPPRRGFGVKR L +YLG ETK K++    EG G  ST   + P  R+
Sbjct: 494 GERTPFLH---NKPPRRGFGVKRVLNNYLGVETKTKNSGNPTEG-GLTSTIVVEAPATRT 549

Query: 186 SIDGPLRQKEN 154
                  +KE+
Sbjct: 550 ETKNMQHKKES 560


>emb|CBI31584.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score =  109 bits (272), Expect = 3e-22
 Identities = 66/131 (50%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
 Frame = -1

Query: 537 LLYVDDLTRQADNLSS--TADVTNHKRVTIP-CIPSSGTPYKSAFATPKFSPGPLVPPAT 367
           LLYVDDL +Q+D  SS  T  V  HKRV+IP  +P S TP K+A  T   SP PL+ PA 
Sbjct: 459 LLYVDDLNKQSDKHSSVPTVSVIAHKRVSIPYSVPVSSTPQKTALTTLSRSPAPLISPAR 518

Query: 366 GDRTPSLNGNGNKPPRRGFGVKRALTSYLGGETKAKSNCQLLEGPGCLSTRNSDMPPARS 187
           G+RTP L+   NKPPRRGFGVKR L +YLG ETK K++    EG G  ST   + P  R+
Sbjct: 519 GERTPFLH---NKPPRRGFGVKRVLNNYLGVETKTKNSGNPTEG-GLTSTIVVEAPATRT 574

Query: 186 SIDGPLRQKEN 154
                  +KE+
Sbjct: 575 ETKNMQHKKES 585


>ref|XP_002315189.1| predicted protein [Populus trichocarpa] gi|222864229|gb|EEF01360.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score =  108 bits (270), Expect = 5e-22
 Identities = 62/129 (48%), Positives = 80/129 (62%), Gaps = 11/129 (8%)
 Frame = -1

Query: 537 LLYVDDLTRQADNLSS--TADVTNHKRVTIP-CIPSSGTPYKSAFATPKFSPGPLVPPAT 367
           LLYVDDLT+ +D LSS  T  V +HK+V+IP  +P SGT YK+ F+TP FSP PL+ P  
Sbjct: 247 LLYVDDLTKHSDKLSSVPTVSVISHKKVSIPYSVPVSGTSYKTTFSTPSFSPMPLISPVR 306

Query: 366 GDRTPSL------NGNGNKPPRRGFGVKRALTSYLGGETKAKSNCQLLEG--PGCLSTRN 211
           G+RTP L      N + NKP  RGFGVKR LT+YLG +++ K      EG  P   +   
Sbjct: 307 GERTPFLHNITTSNNDNNKPHHRGFGVKRVLTNYLGVDSRPKICGNTNEGSCPNPKTNLR 366

Query: 210 SDMPPARSS 184
            D+ P + S
Sbjct: 367 EDLGPEKDS 375


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