BLASTX nr result

ID: Atractylodes22_contig00034819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034819
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317924.1| predicted protein [Populus trichocarpa] gi|2...   238   1e-60
ref|XP_002511990.1| Single-stranded DNA-binding protein, mitocho...   235   9e-60
ref|XP_002270678.1| PREDICTED: single-stranded DNA-binding prote...   232   7e-59
ref|XP_002885264.1| single-strand-binding family protein [Arabid...   231   1e-58
ref|NP_188488.1| single-strand DNA-binding protein [Arabidopsis ...   231   2e-58

>ref|XP_002317924.1| predicted protein [Populus trichocarpa] gi|222858597|gb|EEE96144.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  238 bits (608), Expect = 1e-60
 Identities = 108/161 (67%), Positives = 140/161 (86%)
 Frame = -2

Query: 650 SSDSNDRKRDLVDRPLEKGLDAGIYKAILVGRVGQNAIEKKLRSGRTVTMVSIGTGGMRN 471
           +S+ +   R + DRPLE GLDAG+YKAILVG+VGQN ++KKLRSGR +T+ S+GTGG+RN
Sbjct: 60  TSEGSSGSRMVQDRPLENGLDAGVYKAILVGQVGQNPLQKKLRSGREITIFSMGTGGIRN 119

Query: 470 NRRPLQSEEPRDYANRSMVQWHRVSIYPERLGALVAKNAVPGSILYLEGNLETKIFNDPI 291
           NRRPLQ+E+PR+YANR  VQWHRVS+YPERLG +V +N +PGSILY+EGNLETK+F DPI
Sbjct: 120 NRRPLQNEDPREYANRCAVQWHRVSVYPERLGRVVMQNVLPGSILYVEGNLETKVFTDPI 179

Query: 290 TGLTRRVREIAIRRDGRVIFLGEGSNGQESHQAELKGVGYY 168
           TGL RR+REIA+R++GR++FLG+G+N Q++   ELKG+GYY
Sbjct: 180 TGLVRRIREIAVRQNGRLVFLGKGANDQQASSLELKGLGYY 220


>ref|XP_002511990.1| Single-stranded DNA-binding protein, mitochondrial precursor,
           putative [Ricinus communis] gi|223549170|gb|EEF50659.1|
           Single-stranded DNA-binding protein, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 223

 Score =  235 bits (600), Expect = 9e-60
 Identities = 114/222 (51%), Positives = 159/222 (71%), Gaps = 1/222 (0%)
 Frame = -2

Query: 830 SSLCRRICSSFFSTNPITRQHQSLLI-SLHHFXXXXXXXXXXXXXXXXTIHPEPKSDPLS 654
           +++ RR+C S  S++ I++  +     +L                   +I  +  S   S
Sbjct: 2   ANISRRLCRSLLSSSKISKFSKPFCTGNLSSREEEHDSDESTHNSDTDSISTQSPSSTSS 61

Query: 653 QSSDSNDRKRDLVDRPLEKGLDAGIYKAILVGRVGQNAIEKKLRSGRTVTMVSIGTGGMR 474
                +  +R++  RPLE GLD G+YKAILVG+VGQ+ ++KKLRSG++VTM S+GTGG+R
Sbjct: 62  PPPPESSPQREVYQRPLENGLDLGVYKAILVGQVGQSPLQKKLRSGKSVTMFSLGTGGIR 121

Query: 473 NNRRPLQSEEPRDYANRSMVQWHRVSIYPERLGALVAKNAVPGSILYLEGNLETKIFNDP 294
           NNRRP+Q+EEPR+YANR  VQWHRVS+YPERLG++V K+ +PGSI+YLEGNLETK+F DP
Sbjct: 122 NNRRPMQNEEPREYANRCAVQWHRVSVYPERLGSIVMKHLLPGSIMYLEGNLETKVFTDP 181

Query: 293 ITGLTRRVREIAIRRDGRVIFLGEGSNGQESHQAELKGVGYY 168
           ITGL RR+RE+AIR+DGR++FL +G + +E+   ELKG+GYY
Sbjct: 182 ITGLVRRIREVAIRQDGRIVFLAKGGDEKEASSKELKGLGYY 223


>ref|XP_002270678.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
           [Vitis vinifera] gi|296088446|emb|CBI37437.3| unnamed
           protein product [Vitis vinifera]
          Length = 221

 Score =  232 bits (592), Expect = 7e-59
 Identities = 106/167 (63%), Positives = 138/167 (82%), Gaps = 1/167 (0%)
 Frame = -2

Query: 665 DPLSQSSDSND-RKRDLVDRPLEKGLDAGIYKAILVGRVGQNAIEKKLRSGRTVTMVSIG 489
           DP++ S  ++  + R +VDRPLE GLD GIYKAILVG+ GQ  ++K+LRSGR VT+ S+G
Sbjct: 55  DPIADSPPTDTTQNRMVVDRPLENGLDVGIYKAILVGKAGQTPLQKRLRSGRMVTLFSVG 114

Query: 488 TGGMRNNRRPLQSEEPRDYANRSMVQWHRVSIYPERLGALVAKNAVPGSILYLEGNLETK 309
           TGG+RNNRRPL +E+P++YANRS VQWHRV++YPE LG +V K+  PGS+LYLEGNLETK
Sbjct: 115 TGGIRNNRRPLDNEDPKEYANRSAVQWHRVTVYPENLGNIVMKHVSPGSVLYLEGNLETK 174

Query: 308 IFNDPITGLTRRVREIAIRRDGRVIFLGEGSNGQESHQAELKGVGYY 168
           IF DP+TGL RR+RE+AIRR+GR++FLG+G +G ++   ELKG GYY
Sbjct: 175 IFTDPVTGLVRRIREVAIRRNGRLVFLGKGGDGDQASNVELKGAGYY 221


>ref|XP_002885264.1| single-strand-binding family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297331104|gb|EFH61523.1|
           single-strand-binding family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 223

 Score =  231 bits (590), Expect = 1e-58
 Identities = 112/171 (65%), Positives = 143/171 (83%), Gaps = 1/171 (0%)
 Frame = -2

Query: 677 EPK-SDPLSQSSDSNDRKRDLVDRPLEKGLDAGIYKAILVGRVGQNAIEKKLRSGRTVTM 501
           EPK SDP+S+ S     +R + +RPLE GLD+GI+KAILVG+VGQ  ++KKL+SGRTVT+
Sbjct: 56  EPKASDPVSRFSGE---ERVMEERPLENGLDSGIFKAILVGQVGQLPLQKKLKSGRTVTL 112

Query: 500 VSIGTGGMRNNRRPLQSEEPRDYANRSMVQWHRVSIYPERLGALVAKNAVPGSILYLEGN 321
            S+GTGG+RNNRRPL +E+PR+YA+RS VQWHRVS+YPERL  LV KN  PG+++YLEGN
Sbjct: 113 FSVGTGGIRNNRRPLINEDPREYASRSAVQWHRVSVYPERLAELVLKNVEPGTVIYLEGN 172

Query: 320 LETKIFNDPITGLTRRVREIAIRRDGRVIFLGEGSNGQESHQAELKGVGYY 168
           LETKIF DP+TGL RR+RE+AIRR+GRV+FLG+  + Q+   AEL+GVGYY
Sbjct: 173 LETKIFTDPVTGLVRRIREVAIRRNGRVVFLGKAGDMQQPSSAELRGVGYY 223


>ref|NP_188488.1| single-strand DNA-binding protein [Arabidopsis thaliana]
           gi|9294319|dbj|BAB02216.1| unnamed protein product
           [Arabidopsis thaliana] gi|332642598|gb|AEE76119.1|
           single-strand DNA-binding protein [Arabidopsis thaliana]
          Length = 217

 Score =  231 bits (589), Expect = 2e-58
 Identities = 112/171 (65%), Positives = 143/171 (83%), Gaps = 1/171 (0%)
 Frame = -2

Query: 677 EPK-SDPLSQSSDSNDRKRDLVDRPLEKGLDAGIYKAILVGRVGQNAIEKKLRSGRTVTM 501
           EPK SDP+S+ S     +R + +RPLE GLD+GI+KAILVG+VGQ  ++KKL+SGRTVT+
Sbjct: 50  EPKASDPVSRFSGE---ERVMEERPLENGLDSGIFKAILVGQVGQLPLQKKLKSGRTVTL 106

Query: 500 VSIGTGGMRNNRRPLQSEEPRDYANRSMVQWHRVSIYPERLGALVAKNAVPGSILYLEGN 321
            S+GTGG+RNNRRPL +E+PR+YA+RS VQWHRVS+YPERL  LV KN  PG+++YLEGN
Sbjct: 107 FSVGTGGIRNNRRPLINEDPREYASRSAVQWHRVSVYPERLADLVLKNVEPGTVIYLEGN 166

Query: 320 LETKIFNDPITGLTRRVREIAIRRDGRVIFLGEGSNGQESHQAELKGVGYY 168
           LETKIF DP+TGL RR+RE+AIRR+GRV+FLG+  + Q+   AEL+GVGYY
Sbjct: 167 LETKIFTDPVTGLVRRIREVAIRRNGRVVFLGKAGDMQQPSSAELRGVGYY 217


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