BLASTX nr result

ID: Atractylodes22_contig00034816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034816
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vit...    96   4e-18
gb|ADI71977.1| E3 ubiquitin ligase [Capsicum annuum]                   94   9e-18
ref|NP_173506.1| RING-H2 finger protein ATL80 [Arabidopsis thali...    94   1e-17
ref|XP_002306993.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
gb|ADW66128.1| RING-H2 finger protein RHA3b [Solanum nigrum]           92   3e-17

>ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
          Length = 184

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   CLTEFVVGDEIRVLPRCGHCFHVVCIDRWIGSHFTCPSCRQMLLKTTRCNRCEDPPV-AG 177
           CLTEFV GDEIRVLP+CGH FHV CID W+GSH +CPSCRQ+L+   RC +C   P  + 
Sbjct: 104 CLTEFVGGDEIRVLPQCGHGFHVGCIDTWLGSHCSCPSCRQILV-VARCQKCGGVPASSS 162

Query: 178 ATGIQSP---MTGETNVNRFLP 234
           +TG ++       E +VNRFLP
Sbjct: 163 STGAETESRLKEREDDVNRFLP 184


>gb|ADI71977.1| E3 ubiquitin ligase [Capsicum annuum]
          Length = 197

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 11/89 (12%)
 Frame = +1

Query: 1   CLTEFVVGDEIRVLPRCGHCFHVVCIDRWIGSHFTCPSCRQMLLKTTRCNRCEDPPVAGA 180
           CL EF VG+EIRVLP+CGH FHV CID W+GSH +CPSCR +L+  TRC++C + PVA +
Sbjct: 110 CLAEFAVGEEIRVLPQCGHGFHVGCIDTWLGSHSSCPSCRSILV-VTRCHKCGELPVASS 168

Query: 181 T-----------GIQSPMTGETNVNRFLP 234
           +           G +S +    +VN FLP
Sbjct: 169 SSSSSSAAATGAGTESRLPRNYHVNAFLP 197


>ref|NP_173506.1| RING-H2 finger protein ATL80 [Arabidopsis thaliana]
           gi|68565308|sp|Q9LM69.1|ATL80_ARATH RecName:
           Full=RING-H2 finger protein ATL80
           gi|8886938|gb|AAF80624.1|AC069251_17 F2D10.34
           [Arabidopsis thaliana] gi|15027985|gb|AAK76523.1|
           unknown protein [Arabidopsis thaliana]
           gi|332191907|gb|AEE30028.1| RING-H2 finger protein ATL80
           [Arabidopsis thaliana]
          Length = 197

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/85 (50%), Positives = 57/85 (67%), Gaps = 7/85 (8%)
 Frame = +1

Query: 1   CLTEFVVGDEIRVLPRCGHCFHVVCIDRWIGSHFTCPSCRQMLLKTTRCNRCEDPPVAGA 180
           CL EF  GDE+RVLP+CGH FHV CID W+GSH +CPSCRQ+L+   RC++C   P + +
Sbjct: 114 CLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILV-VARCHKCGGLPGSSS 172

Query: 181 TGIQSP-------MTGETNVNRFLP 234
           +G++S          GE + N FLP
Sbjct: 173 SGLESEPEIEIRIKQGEDDPNSFLP 197


>ref|XP_002306993.1| predicted protein [Populus trichocarpa] gi|222856442|gb|EEE93989.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 46/86 (53%), Positives = 57/86 (66%), Gaps = 8/86 (9%)
 Frame = +1

Query: 1   CLTEFVVGDEIRVLPRCGHCFHVVCIDRWIGSHFTCPSCRQMLLKTTRCNRCEDPP---- 168
           CLTEF VGDEIRVLP+CGH FHV CID W+GSH +CPSCRQ+L+   RC +C   P    
Sbjct: 77  CLTEFSVGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILM-VDRCQKCGGLPSGSS 135

Query: 169 -VAGATGIQSP---MTGETNVNRFLP 234
            ++G  G ++       E + NRFLP
Sbjct: 136 SISGGGGAETEAGLKECEDDANRFLP 161


>gb|ADW66128.1| RING-H2 finger protein RHA3b [Solanum nigrum]
          Length = 142

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 10/88 (11%)
 Frame = +1

Query: 1   CLTEFVVGDEIRVLPRCGHCFHVVCIDRWIGSHFTCPSCRQMLLKTTRCNRCEDPPVAGA 180
           CL EFVVGDEIRVLP+CGH FHV CID W+GSH +CPSCRQ+ +  +RC+ C + PV   
Sbjct: 59  CLMEFVVGDEIRVLPQCGHGFHVGCIDTWLGSHSSCPSCRQIPV-VSRCHMCGELPV--- 114

Query: 181 TGIQSPMTGET----------NVNRFLP 234
           T   S + GET          +VN FLP
Sbjct: 115 TSSSSDVRGETAGSRSAPNNYHVNAFLP 142


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